Gene
| Gene Model ID | pfu_aug2.0_350.1_00638 |
|---|---|
| Locus | scaffold350.1 : 64175 ... 71515 : - |
| To GenomeBrowser | scaffold350.1:64175..71515 |
| Genes list of scaffold | scaffold350.1 |
| Synonym | pfu_aug1.0_5801.1_38217 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_350.1_00638.t1 | 3 | 1 | TNFR_c6 | 23 | 43 | 1.6e-06 | 28.0 | 0.00052 | 3.8 | 7.6 |
| pfu_aug2.0_350.1_00638.t1 | 3 | 2 | TNFR_c6 | 62 | 73 | 1.6e-06 | 28.0 | 0.00054 | 4.0 | 7.5 |
| pfu_aug2.0_350.1_00638.t1 | 3 | 3 | TNFR_c6 | 70 | 108 | 1.6e-06 | 28.0 | 1.1e-09 | 8.4e-06 | 25.7 |
Transcript
| Transcript ID | pfu_aug2.0_350.1_00638.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_350.1_00638.t1 atgcagacgatggccaagcgtcgaccccgagagaagaagaaagtctggtgtgattttgcaaagaaaaagtattattttcc gcaactagctaaatgtatgaaatgcgacaaatgcctgaaaggagagggacaccccattcttgcgagtgaaaaagatgtca aaatggaccctgtccacggagctttgaattgcctcccctgtcgcacatgtccaaaggggtactttaatccaggaaggaaa ttccgttgtaaacaatgtagagattgtgctggattggggaaaactttagtgacaccctgtaattctacgtccaatgctgt ttgtggtgacactatacataaagggaatcaagatacatgtcccgtacggtttgtgaagaacgttaacaacaagctgatta aaccaccagggaaagccgaagaacgcggattactgacaaatgtgcgacgttcaaattctccagccgttatcttaattcaa gaaaatcattcagacgacactccaattaacaacgaggagatggcgccaccaggtagaacagaaacacaaccaaaaaagtt agacaactcctgcagccaaagttcgacatcaactcaaacttctgaaaagccgtttacgtcattaaatacaatgacgacga gtttgtctgattctgttctcacaaattcacgacaatttgagcgacgaaatagtcctattccgaatctttcaatttttaat tttgataaacgtttagtcgacgaagattcaagggaagacgatttacaatggaaaccccggtgcaagagcatagactacag ggattttattcgtcagaaatctttgacagtgccaaaacaagtgacgtgtgatagtgacccagatgacgaatttcgggagc tttctaactttacctttaatctgaagtcgaatccaaacgaatgcacggatacttga |
|
Protein
| Protein ID | pfu_aug2.0_350.1_00638.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_350.1_00638.t1 MQTMAKRRPREKKKVWCDFAKKKYYFPQLAKCMKCDKCLKGEGHPILASEKDVKMDPVHGALNCLPCRTCPKGYFNPGRK FRCKQCRDCAGLGKTLVTPCNSTSNAVCGDTIHKGNQDTCPVRFVKNVNNKLIKPPGKAEERGLLTNVRRSNSPAVILIQ ENHSDDTPINNEEMAPPGRTETQPKKLDNSCSQSSTSTQTSEKPFTSLNTMTTSLSDSVLTNSRQFERRNSPIPNLSIFN FDKRLVDEDSREDDLQWKPRCKSIDYRDFIRQKSLTVPKQVTCDSDPDDEFRELSNFTFNLKSNPNECTDT |
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