Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_350.1_00639
Locus scaffold350.1 : 80906 ... 93394 : +
To GenomeBrowser scaffold350.1:80906..93394
Genes list of scaffold scaffold350.1
Synonym pfu_aug1.0_2547.1_30157

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_350.1_00639.t1 gi|524870276|ref|XP_005091923.1| PREDICTED: uncharacterized protein LOC101856160 [Aplysia californica] 0.0
pfu_aug2.0_350.1_00639.t1 gi|260835693|ref|XP_002612842.1| hypothetical protein BRAFLDRAFT_67210 [Branchiostoma floridae] 0.0
pfu_aug2.0_350.1_00639.t1 gi|676491772|ref|XP_009065706.1| hypothetical protein LOTGIDRAFT_169159 [Lottia gigantea] 0.0

Transcript
Transcript IDpfu_aug2.0_350.1_00639.t1
Definition-
>pfu_aug2.0_350.1_00639.t1
atgttgcgctttaacttccgttacagcgacgtttttgtaatcaccattcttgtgacgtgcgtgatgatttcgtctgcaat
gggaaaaaatacaagtacttgcacatatacggatctcagtcagcctatagatggaaaatcaagcacatatccattactgg
agaaatatgaagtcggtttgctgatggtgctaggttttggtggtttctctgtcctcctggcggtgctacataacgccata
cgacgccatatctacaaggacgctgacagcctcgacaccgtatttgacgccggcggcaaggtgtcactaagcctcacggc
cgtcacggtgacgtcacaacttctctggccagctgacttcctgcaactacccacgactacgtataaggcagggctaggtg
gcgcttttttcttcgtcatcgctattgtcattgacatcatgttgtttccaatgttatcactggaactgaaaacaaaagca
cctggagccaaaacattccttcagatcatatatcatcgctttggaaagcctgctcacattgtcttctgtatcattgcctt
actcactaacctcgtgaccatgacgtcacttattttggcggcaaagtcggccattacagtgatcactaaggacgcctcag
acgagtttattatgattgtactggctatacttttcggttcatactgttttataggaggccttgggacaacgttctatatt
tcttatttcaacacagccttgacctttgtaagtctcctcgtattcatagttcaattcagttaccttgacaacgaccaacc
gtttacaagcaaagaatccatgttcgatgctcttagttgtttgcgcgcttcaaataagagtggtaactatgacgacgcaa
ttctaacattcagatcaagatcgggagctatgtacggaatttcccttctcttcatggcaacctctctgagcttttgtgac
caagctaattggcagagcagaatagcggcaaaaccaacacaaggcgttatagggttcttcatagcagcttttctgtattt
ctccattcctatggcaatcggtctaccagcaacatttgggtacctatcaaagagctatcagaataatgggacacatttgt
tatcatctctagacattaataatggtttcatcgcaccttacatcatagataacgtcatgggatcaactgggggttatctc
ctccttatgatgattaccatggcactgatgtccacggggtcaggtgaggtcatggccgtgtcatctatcatcgtctatga
catctataaaatctacgtaaatcctttcagaaagaactgtcctccatctttatgccaactttgtggtaaaagcaaaactc
gacgaggattttcggaaagtcagatctgcgattgtgtacccggttcagaatgtagtaaatgccaaatggacattgctcta
gcaagaaaagcaagaaattttgaagtaaaatattcctgcccgattcacggagactatcgtagctacgaaagtttgctgat
gcattacaaaagttggtgcattgtctgggtcaccttagcgattataccatacggacttgtcctcattgccagcaacatca
acctccattgggcgctttacttccttcagagtctcctgagcccttttatcgttcctctgctactgtcaatcacgtggtcc
aagtgtacatctcaagccgtaattgctgatgcagttgcggattaa

Protein
Protein IDpfu_aug2.0_350.1_00639.t1
Definition-
>pfu_aug2.0_350.1_00639.t1
MLRFNFRYSDVFVITILVTCVMISSAMGKNTSTCTYTDLSQPIDGKSSTYPLLEKYEVGLLMVLGFGGFSVLLAVLHNAI
RRHIYKDADSLDTVFDAGGKVSLSLTAVTVTSQLLWPADFLQLPTTTYKAGLGGAFFFVIAIVIDIMLFPMLSLELKTKA
PGAKTFLQIIYHRFGKPAHIVFCIIALLTNLVTMTSLILAAKSAITVITKDASDEFIMIVLAILFGSYCFIGGLGTTFYI
SYFNTALTFVSLLVFIVQFSYLDNDQPFTSKESMFDALSCLRASNKSGNYDDAILTFRSRSGAMYGISLLFMATSLSFCD
QANWQSRIAAKPTQGVIGFFIAAFLYFSIPMAIGLPATFGYLSKSYQNNGTHLLSSLDINNGFIAPYIIDNVMGSTGGYL
LLMMITMALMSTGSGEVMAVSSIIVYDIYKIYVNPFRKNCPPSLCQLCGKSKTRRGFSESQICDCVPGSECSKCQMDIAL
ARKARNFEVKYSCPIHGDYRSYESLLMHYKSWCIVWVTLAIIPYGLVLIASNINLHWALYFLQSLLSPFIVPLLLSITWS
KCTSQAVIADAVAD

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495