Gene
| Gene Model ID | pfu_aug2.0_350.1_00641 |
|---|---|
| Locus | scaffold350.1 : 151146 ... 153474 : + |
| To GenomeBrowser | scaffold350.1:151146..153474 |
| Genes list of scaffold | scaffold350.1 |
| Synonym | pfu_aug1.0_2547.1_30160 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein son isoform x5 | GO:0003677 GO:0005634 GO:0010468 GO:0051252 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_350.1_00641.t1 | 1 | 1 | Homeobox | 416 | 473 | 1.5e-10 | 40.5 | 8.3e-14 | 4.1e-10 | 39.1 |
| pfu_aug2.0_350.1_00641.t1 | 1 | 1 | Homeobox_KN | 432 | 471 | 7.1e-10 | 38.4 | 4.6e-13 | 2.3e-09 | 36.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_350.1_00641.t1 | gi|676462998|ref|XP_009056454.1| | hypothetical protein LOTGIDRAFT_162246 [Lottia gigantea] | 5.0e-17 |
| pfu_aug2.0_350.1_00641.t1 | gi|676463001|ref|XP_009056455.1| | hypothetical protein LOTGIDRAFT_162247 [Lottia gigantea] | 2.0e-16 |
| pfu_aug2.0_350.1_00641.t1 | gi|676476871|ref|XP_009060936.1| | hypothetical protein LOTGIDRAFT_60240, partial [Lottia gigantea] | 1.0e-13 |
| pfu_aug2.0_350.1_00641.t1 | gi|612016420|ref|XP_007493317.1| | PREDICTED: protein SON isoform X5 [Monodelphis domestica] | 2.0e-12 |
| pfu_aug2.0_350.1_00641.t1 | gi|612016416|ref|XP_007493315.1| | PREDICTED: protein SON isoform X3 [Monodelphis domestica] | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_350.1_00641.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_350.1_00641.t1 atggctgacttttttgacatgctattggctgcgcctgtatctccactacccatcgccatcaccgccactacaacgctgga agacgtcatcaatgccaccatactcaatcctgactcatctactcaagcaaactcagggtcaactaccaacgccaactcag actcagcaaccaatgccaactcagcgactcatcaactcagccccactgatgactcatctactcagggaaactcaccagcc actactcaaactcacactccagactacgacccctccccagcggagtccagactcgacgatgctctctacagcctactcga ctcacccagaaaggcgaccaaactcaccaagaatccaatgttccgggacctccaagccatactcaaagccgactgctcat ccgctgtctcaccagactcactcttcaagacactacccagggccaagtccaccaactcagtcgtcacccgggaactcaaa ctccaacatcgactcaccaaactcagagactactacccatctcaggtcactcaactcagctccttccacaagtaccaagc ctccatcgtcgagacagaccgctaccgagaactccacgaactcaacaactcacgaccaatcatgagggccgccatcaacg acttctacgaccagatgctacatcagatcatcgaccgtgtggagatcagcgtgggcaccatggaagaggcactcactcag caactcaacgccactcagacctcaactaccagaccaccaactcagtactcagcacctactcagtacccagctgccactca ctccgcgtctactcagtactcagcaacaactcagagccagtatccagtacctactcagacccactactcagcacctactc agacccactactcagtgccaactcaaacccactactcagcaccaacccagacccagtactcagtgcctactcaaccacca actcagtactcagcacctactcagtacccagctgccactcactccgcgtctactcagtactcagcaacaactcagagcca gtatccagtacctactcagacccactactcagcacctactcagacccactactcagtgccaactcaaacccactactcag caccaacccagacccagtactcagtgcctactcagtatccagtggtcaactactcagcaaccaccaaccctcagacgcca ccaactcatacgcactccaaggatgcacacttcaaactcaacctgcgcaccagacccagcctctcccagcgtgctattcg cctgatggaagtatggtaccacgcccacatcgaccatccgtaccccgacacccaggacgtcgagaccctagcaaccgccg gcaacatcaccgaggagcaggtcaagaagtggttcgccaacaaacgcaacaggagccgcaacatccgcccgatgtcccag atagtgcgccgcaagagacagatccaggccgccgccaccaccaaccgcatcatccgggtacccagcttgtgttag |
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Protein
| Protein ID | pfu_aug2.0_350.1_00641.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_350.1_00641.t1 MADFFDMLLAAPVSPLPIAITATTTLEDVINATILNPDSSTQANSGSTTNANSDSATNANSATHQLSPTDDSSTQGNSPA TTQTHTPDYDPSPAESRLDDALYSLLDSPRKATKLTKNPMFRDLQAILKADCSSAVSPDSLFKTLPRAKSTNSVVTRELK LQHRLTKLRDYYPSQVTQLSSFHKYQASIVETDRYRELHELNNSRPIMRAAINDFYDQMLHQIIDRVEISVGTMEEALTQ QLNATQTSTTRPPTQYSAPTQYPAATHSASTQYSATTQSQYPVPTQTHYSAPTQTHYSVPTQTHYSAPTQTQYSVPTQPP TQYSAPTQYPAATHSASTQYSATTQSQYPVPTQTHYSAPTQTHYSVPTQTHYSAPTQTQYSVPTQYPVVNYSATTNPQTP PTHTHSKDAHFKLNLRTRPSLSQRAIRLMEVWYHAHIDHPYPDTQDVETLATAGNITEEQVKKWFANKRNRSRNIRPMSQ IVRRKRQIQAAATTNRIIRVPSLC |
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