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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_350.1_00642
Locus scaffold350.1 : 155841 ... 164295 : -
To GenomeBrowser scaffold350.1:155841..164295
Genes list of scaffold scaffold350.1
Synonym pfu_aug1.0_23362.1_04291

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_350.1_00642.t1 1 1 MOR2-PAG1_N 153 251 1.3e-20 73.5 1.4e-24 2.1e-20 72.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_350.1_00642.t1 gi|602677075|ref|XP_007443991.1| PREDICTED: protein furry homolog-like, partial [Python bivittatus] 0.0
pfu_aug2.0_350.1_00642.t1 gi|697027278|ref|XP_009575513.1| PREDICTED: protein furry homolog [Fulmarus glacialis] 0.0
pfu_aug2.0_350.1_00642.t1 gi|545844780|ref|XP_005666702.1| PREDICTED: protein furry homolog-like, partial [Sus scrofa] 0.0

Transcript
Transcript IDpfu_aug2.0_350.1_00642.t1
Definition-
>pfu_aug2.0_350.1_00642.t1
atggaccggaaagatacgaatgatggtccgagcccaatgatacggtttccatggcgacgcgacttgagtcgtgtcacgac
cgaggatggtgccaaacctggagaatacattctacagagtttgttccttgagttttgtgcgactgccgagaggaaggtgg
aactggtcatagcagagccattggaaaagccattagccaagtcattgcagagaggagaggatgcccagctagatcaggaa
aagccgttagccaagtcattgcagagaggagaggatgcccagctagatcagctcctgaatgcctttggcacactgtcaga
gcaatgtctaccctccatactgaagagtttattccgctggtttgaacggcagaatttaagcgagggatgtacccagcctg
atagacatagacacagaagtaaagggagcaaggattatttgtgtgagagacgggatttgaatttccacccaggctatgat
gaccttgtcaaccatattatcacacaggctttcagacatttcaagtacagagacggaatacagacaaacccaaactcggc
caatatcagtattatagctgatttgtatgcagaagtcataggtgtaatggtacagtcaaggtttcaggcagtaaggaagc
acttcatgtcagagttgaaggaactgaagtcacgtgaccaaactccgtacattgctcaaagtataattagtttgctcacc
ggactgaaatacttcagggtcaaggtaattagcgtggtgacaacagacggggagagcaattatttgataattagtaatta
tctgtccaccatgtgtgttaattgggaatacctgaagggcatttcgttacatcaggtgaaaatagtgaagaaactatga

Protein
Protein IDpfu_aug2.0_350.1_00642.t1
Definition-
>pfu_aug2.0_350.1_00642.t1
MDRKDTNDGPSPMIRFPWRRDLSRVTTEDGAKPGEYILQSLFLEFCATAERKVELVIAEPLEKPLAKSLQRGEDAQLDQE
KPLAKSLQRGEDAQLDQLLNAFGTLSEQCLPSILKSLFRWFERQNLSEGCTQPDRHRHRSKGSKDYLCERRDLNFHPGYD
DLVNHIITQAFRHFKYRDGIQTNPNSANISIIADLYAEVIGVMVQSRFQAVRKHFMSELKELKSRDQTPYIAQSIISLLT
GLKYFRVKVISVVTTDGESNYLIISNYLSTMCVNWEYLKGISLHQVKIVKKL

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