Gene
| Gene Model ID | pfu_aug2.0_350.1_00644 |
|---|---|
| Locus | scaffold350.1 : 171793 ... 196879 : - |
| To GenomeBrowser | scaffold350.1:171793..196879 |
| Genes list of scaffold | scaffold350.1 |
| Synonym | pfu_aug1.0_24136.1_26144 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| adenylosuccinate lyase | GO:0004018 GO:0006189 GO:0044208 GO:0070626 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_350.1_00644.t1 | 2 | 1 | Lyase_1 | 174 | 320 | 1.7e-21 | 76.7 | 1.7e-15 | 6.4e-12 | 45.2 |
| pfu_aug2.0_350.1_00644.t1 | 2 | 1 | DUF1331 | 374 | 391 | 3.6e-06 | 26.3 | 1.4e-05 | 0.052 | 13.0 |
| pfu_aug2.0_350.1_00644.t1 | 2 | 1 | ADSL_C | 390 | 410 | 8.8e-19 | 67.3 | 0.00016 | 0.59 | 10.1 |
| pfu_aug2.0_350.1_00644.t1 | 2 | 2 | Lyase_1 | 409 | 453 | 1.7e-21 | 76.7 | 1.7e-10 | 6.2e-07 | 28.8 |
| pfu_aug2.0_350.1_00644.t1 | 2 | 2 | DUF1331 | 507 | 524 | 3.6e-06 | 26.3 | 1.4e-05 | 0.052 | 13.0 |
| pfu_aug2.0_350.1_00644.t1 | 2 | 2 | ADSL_C | 523 | 605 | 8.8e-19 | 67.3 | 2.6e-18 | 9.5e-15 | 54.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_350.1_00644.t1 | gi|527264331|ref|XP_005150389.1| | PREDICTED: adenylosuccinate lyase isoform X1 [Melopsittacus undulatus] | 0.0 |
| pfu_aug2.0_350.1_00644.t1 | gi|527264333|ref|XP_005150390.1| | PREDICTED: adenylosuccinate lyase isoform X2 [Melopsittacus undulatus] | 0.0 |
| pfu_aug2.0_350.1_00644.t1 | gi|542159968|ref|XP_005488709.1| | PREDICTED: adenylosuccinate lyase isoform X2 [Zonotrichia albicollis] | 0.0 |
| pfu_aug2.0_350.1_00644.t1 | gi|410901961|ref|XP_003964463.1| | PREDICTED: adenylosuccinate lyase [Takifugu rubripes] | 0.0 |
| pfu_aug2.0_350.1_00644.t1 | gi|148226240|ref|NP_001080593.1| | adenylosuccinate lyase [Xenopus laevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_350.1_00644.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_350.1_00644.t1 atgaaaagggatttaatttggacggtgcccgtcatggagtctcgctgtcacgagcggtttccggtgttgtcttcggtccg cgcggtcagcatggattctacggagcatcaaaaatatcgttctcccttagtgtctagatatgctagtcctgaaatgtcat acaattttagtgacatgaagaaattttcaacctggagaaagttatggacgtttctagcaaaggccgaaaagaaacttggt ttgaatattacagacaagcagatccaggaaatggaagacaacctgaagaatattgatttcaaaagagccgcggaggaaga gaaaaaagtacggcatgatgtgatggcacacgtccacacatttgccgcttgttgtccactagcggcacctatcatccacc tcggtgccacctcagcctatgtgggagataatacggatttgattgtaatgcgagatggatttgatatacttctgcccaag gtaaaaaaaggcttcatgaaaagacaaaagcggccaaaaccagcacagttgaccacgatggggaaacgggcctgtatctg gatccaagaccttgtgatggatctacgcaatttggagacagctcgggaaaacctgcgtttccgtggcgtgaagggtacca ccggcacacaggctagcttcttacagctgtttgaaggggacgaggaaaaggttgagatgttagacagtctagtgacagaa atggctgggttcaaagagaacttcatcatttgcggccagacgtacagtaggaaagttgatgttgactgtctgaatgtatt ggcgagtttgggggcttcagttcacaagatatgtacagatatacgcttacttgcaaatttcaaagagctagaggaaccgt ttgagaaggatcagattggttctagtgccatgccgtataagaggaaccccatgaggagcgaaaggtgttgttcgttggcg cggcatctcatgtgtctggtacaaaatccactgatgacggcttctgtacagtggatggaaagaacactagatgacagtgc aaataggcgagtttgtttaccagaggcgttcctaactgccgatatagttctcagcactctacagaacatatcagaaggac ttgtagtctaccctaaggtcattgagagaagagtcaaacaagagttacctttcatggcaacagagaacgtcataatggcc atggtgaaagccggaggtaatagacagatatgtacagatatacggttacttgcaaatttcaaagagctagaggaaccgtt tgagaaagatcagattggttctagtgccatgccgtataagaggaaccccatgaggagcgagaggtgttgttcattggcgc gtcatctcatgtgtctggtacaagatccactgatgacggcttctgtacaatggatggaaagaacgctagatgacagtgca aataggcgagtttgtttaccagaggcgttcctaactgccgatatagttctcagcactctacagaacatttcagaaggact tgtagtctatcctaaggtcattgagagaagagtcaaacaagagttacctttcatggcaacagagaacgtcataatggcca tggtgaaagctggaggtaatagacaggaatgccacgagcagattagagtgttgtcccaccaggctggtcaagtggtcaag caggagggcggagacaatgaccttgtccagaggattaaggactgtccatacttcaaaccggtacaccatcagttggactc cttactggacccgtcaacatttacaggacgagcccctagtcaggtaacaaaattcttagagaaagaagtgcagccaaaac taaagaaatacgaagataacctggactcaacagtgcaattagaactttga |
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Protein
| Protein ID | pfu_aug2.0_350.1_00644.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_350.1_00644.t1 MKRDLIWTVPVMESRCHERFPVLSSVRAVSMDSTEHQKYRSPLVSRYASPEMSYNFSDMKKFSTWRKLWTFLAKAEKKLG LNITDKQIQEMEDNLKNIDFKRAAEEEKKVRHDVMAHVHTFAACCPLAAPIIHLGATSAYVGDNTDLIVMRDGFDILLPK VKKGFMKRQKRPKPAQLTTMGKRACIWIQDLVMDLRNLETARENLRFRGVKGTTGTQASFLQLFEGDEEKVEMLDSLVTE MAGFKENFIICGQTYSRKVDVDCLNVLASLGASVHKICTDIRLLANFKELEEPFEKDQIGSSAMPYKRNPMRSERCCSLA RHLMCLVQNPLMTASVQWMERTLDDSANRRVCLPEAFLTADIVLSTLQNISEGLVVYPKVIERRVKQELPFMATENVIMA MVKAGGNRQICTDIRLLANFKELEEPFEKDQIGSSAMPYKRNPMRSERCCSLARHLMCLVQDPLMTASVQWMERTLDDSA NRRVCLPEAFLTADIVLSTLQNISEGLVVYPKVIERRVKQELPFMATENVIMAMVKAGGNRQECHEQIRVLSHQAGQVVK QEGGDNDLVQRIKDCPYFKPVHHQLDSLLDPSTFTGRAPSQVTKFLEKEVQPKLKKYEDNLDSTVQLEL |
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