Gene
| Gene Model ID | pfu_aug2.0_3502.1_09161 |
|---|---|
| Locus | scaffold3502.1 : 6696 ... 21640 : + |
| To GenomeBrowser | scaffold3502.1:6696..21640 |
| Genes list of scaffold | scaffold3502.1 |
| Synonym | pfu_aug1.0_3232.1_37537 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3502.1_09161.t1 | 1 | 1 | DUF4518 | 78 | 373 | 0.0 | 211.2 | 0.0 | 0.0 | 206.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3502.1_09161.t1 | gi|676482351|ref|XP_009062670.1| | hypothetical protein LOTGIDRAFT_128762 [Lottia gigantea] | 1.4013e-45 |
| pfu_aug2.0_3502.1_09161.t1 | gi|524875597|ref|XP_005094524.1| | PREDICTED: uncharacterized protein C3orf38 homolog [Aplysia californica] | 3.9937e-43 |
| pfu_aug2.0_3502.1_09161.t1 | gi|47507519|gb|AAH71050.1| | LOC432062 protein, partial [Xenopus laevis] | 6.99949e-42 |
| pfu_aug2.0_3502.1_09161.t1 | gi|632956310|ref|XP_007893895.1| | PREDICTED: uncharacterized protein C3orf38 homolog [Callorhinchus milii] | 9.99967e-42 |
| pfu_aug2.0_3502.1_09161.t1 | gi|148237790|ref|NP_001090041.1| | uncharacterized protein LOC735114 [Xenopus laevis] | 6.0e-40 |
Transcript
| Transcript ID | pfu_aug2.0_3502.1_09161.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3502.1_09161.t1 atgtctgatcaggaggacctaggaggggctatcagtgccagtgaagatgaggatgatttggatgtcaggagacatgccaa gctgatagatgccatctcatcactggacggtaaaaagagagtaaagctgagtgagcgaacagtacctgtccaacaagtgt cagagtttaccttcacctctggagataaggaaccaggggatgctatgtttgagttgcctttatttatgacactgatgccc ctatgtaataatggcagttgtgtggtatactctaataggctagtaccgtaagccgttaaagccatcatcgcatgtagtag ttcagcagaggagatctttggtagacagaaaataacaaagaaatgcatagttaactatttggttgcaaagaatattaatt tctctgccaagtggaataagagtgagttatgtgccaaagtgttggaatattggaagcaccagtacgagatgacatgtgca cagggttcatctacccctgcgtcaccagaacaaagtaggcacgttaatccgccagaagcaggtgctcctcatcaagtagt ctaccaaacatcaccaggtccagtaacacacatcgtgaataactacagtacagtgtacaaccaagtcattatctcccctg gggcagaaaaatccacaaccggtggtggagaatccacatctgtcataaccaatccacaccttcaacaattaggagagaca tttaccaagtggttctatgagcgctggaatgccgaaaatccatcagtgtcttatgcagtaaatgactttggaactcatca cttctgggatgatgctagtctactttcactttgccttactccggagcgcattgaggatcagtgtacgggatctgcagcag tatcagaaaaattgttatcttttgttagggatcagcaacttatgtttaatcccaatctgactgctgagggtataaaggtt aaatctgacccacacggattagtgattatactagtgtgtggtactgtacatcaatctaatagatttgttggtatattcga tcaaatgtttggtttaattaaagatcctgctatgaatgacaattggagaatcaaagtcatgaagcttaaaataagtgtta ccagtgccttctcaatgccaaaattatcggataaaagctacgaggagattcaggatcttgaaagagtatga |
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Protein
| Protein ID | pfu_aug2.0_3502.1_09161.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3502.1_09161.t1 MSDQEDLGGAISASEDEDDLDVRRHAKLIDAISSLDGKKRVKLSERTVPVQQVSEFTFTSGDKEPGDAMFELPLFMTLMP LCNNGSCVVYSNRLVPXAVKAIIACSSSAEEIFGRQKITKKCIVNYLVAKNINFSAKWNKSELCAKVLEYWKHQYEMTCA QGSSTPASPEQSRHVNPPEAGAPHQVVYQTSPGPVTHIVNNYSTVYNQVIISPGAEKSTTGGGESTSVITNPHLQQLGET FTKWFYERWNAENPSVSYAVNDFGTHHFWDDASLLSLCLTPERIEDQCTGSAAVSEKLLSFVRDQQLMFNPNLTAEGIKV KSDPHGLVIILVCGTVHQSNRFVGIFDQMFGLIKDPAMNDNWRIKVMKLKISVTSAFSMPKLSDKSYEEIQDLERV |
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