Gene
| Gene Model ID | pfu_aug2.0_3502.1_09163 |
|---|---|
| Locus | scaffold3502.1 : 43346 ... 47879 : + |
| To GenomeBrowser | scaffold3502.1:43346..47879 |
| Genes list of scaffold | scaffold3502.1 |
| Synonym | pfu_aug1.0_34178.1_19521 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3502.1_09163.t1 | 1 | 1 | UPF0556 | 20 | 147 | 5.8e-25 | 87.3 | 8.2e-29 | 6.1e-25 | 87.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3502.1_09163.t1 | gi|676439284|ref|XP_009048804.1| | hypothetical protein LOTGIDRAFT_149784 [Lottia gigantea] | 8.0e-30 |
| pfu_aug2.0_3502.1_09163.t1 | gi|585657774|ref|XP_006815897.1| | PREDICTED: UPF0556 protein C19orf10-like [Saccoglossus kowalevskii] | 4.0e-26 |
| pfu_aug2.0_3502.1_09163.t1 | gi|115629115|ref|XP_789857.2| | PREDICTED: UPF0556 protein C19orf10 homolog [Strongylocentrotus purpuratus] | 3.0e-22 |
| pfu_aug2.0_3502.1_09163.t1 | gi|742102778|ref|XP_010869771.1| | PREDICTED: UPF0556 protein C19orf10 homolog [Esox lucius] | 2.0e-21 |
| pfu_aug2.0_3502.1_09163.t1 | gi|551498046|ref|XP_005800576.1| | PREDICTED: UPF0556 protein C19orf10 homolog [Xiphophorus maculatus] | 7.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_3502.1_09163.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3502.1_09163.t1 atgtggcgatcattactgttatctttgtacatacaatgtatatctgtgtttgggtcagatgatgatgacgaaaagaccta ctcgttcaaagtcaatccaggaggacagttgttgcatcacgaggagacgcggaaagatattagttgcaagttttcttacc aagctcaaggaggcaccaatgaggattggttaatgaagatttcattgaatgcaaaaggagagtactcatgcactgtggag aggccaggatcatatctcttcttccaaagttttgaactcaaagtcacaggagccaaatcagtagaaggttatgcctttgg tcagatttctaatccattaaatcctgatgagtacagccttgattttgatagtaaaaatgtaggaacaattaaacaggtag atggaaaattcaagtcacagcttcaaatggtatacataaaagcactacagggaacaaaagaggaattatga |
|
Protein
| Protein ID | pfu_aug2.0_3502.1_09163.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3502.1_09163.t1 MWRSLLLSLYIQCISVFGSDDDDEKTYSFKVNPGGQLLHHEETRKDISCKFSYQAQGGTNEDWLMKISLNAKGEYSCTVE RPGSYLFFQSFELKVTGAKSVEGYAFGQISNPLNPDEYSLDFDSKNVGTIKQVDGKFKSQLQMVYIKALQGTKEEL |
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