Gene
| Gene Model ID | pfu_aug2.0_3503.1_12475 |
|---|---|
| Locus | scaffold3503.1 : 1444 ... 28505 : - |
| To GenomeBrowser | scaffold3503.1:1444..28505 |
| Genes list of scaffold | scaffold3503.1 |
| Synonym | pfu_aug1.0_10456.1_02919 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nicastrin-like protein | GO:0016020 GO:0071704 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3503.1_12475.t2 | 1 | 1 | Nicastrin | 280 | 510 | 0.0 | 170.8 | 0.0 | 0.0 | 170.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3503.1_12475.t2 | gi|269784913|ref|NP_001161608.1| | nicastrin-like protein [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3503.1_12475.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3503.1_12475.t1 atgaaaaaattacgagttatctcccccaaaaaggaagaagaaatggacggtcttagtcagaggacattcggcctgttgat attcttattaatcattgaaatcggggaaggattgagaataagtaacaaaacttatatagaaatctctggtaaagcagcct gtatcaggagactaaacggcacacaccaagtggggtgtacatcgggaataaagggggacgtgggagttgtacattacata cagaattcctcagattttgattggttactccagaggggtcctgataaaccatacgctgtgttattacactcggaagattt cagcccggatagagtaagacagctatggtattctgggaaagtgaacggcatcatggtcatacacactacagatgacacag atctcacaccttttccctccactttctctcctgacaacacctgtccaggggatccatatggtctttaccatggcgacagt acctatggtaactgtaaacgacaggaatggaatccacagggaaacggcttgttttatgcagacttcagtttcccgatatt tatactgaccaataaatcggagatcagtgaaatcattaatacctgctatataaagttcaacaagcccctagaggatggtt ctccaagacctcaccccctctgtgctgtagaactgaaggctcgaatgtcaggcgccaaagattcggaaacctgcattcgt cgtacgaatactccgacgaatctcaacccagatacgtactgcgatcctttaggggataaaagcgtcgtcacgacgatgaa ggctacaacacagaatgaagatttaccagataattctattattatggctatagcaaggctggactcattttccttgtttg agaatatttatcccagtgcagacaaccatgttacaggaattgtgggattgctagctgcagcagaggctcttgggaaatat caggacgacttcatgaaaaatgacaccaaggatattatgtttgcctttctgaatggagaggcatttgactacattggttc tagcagagttatatatgatatgggtagagcggaattccctaccaaatataaagacggtcaaacacagctacacaacatca acttaaaaaagctacactccatcatggaagtcaatcaactcggacacagagatgacgggaaattgtggatgcatacagat ccactcagtggatttgtggccacacagattgaagaaatggtggatatcataaaaaatttaagcaacaatttgatagacag agctgatatcagtttgccccttcctcctgcgtcaactcagaggttcttgaaaaaaatggagaagaaaattccagctgtcg tcatcactgaccaccagagggcgttcacaaataagtattataacagcaggtttgacctagccagtacgatcgaggcagac ccaggtaacgtgactaacccagaggaagttgttacagagcaggcacggaaccttacactagcggcatctgctttagctaa atcactgtacagactagcaacgggattggatcctcctcagaacatggaggcagatcagtcaacagtcagtcagctgttgt attgcttccttcagtctccgtactgtgaattatttcgtcaaatagtatcaccagatgatgacagcacactcaagaaaaag gcagagtcaggtccctatcctttctacgtcagcgtcgacacggtagacaatcatgtgacctcacttactaaacgactgat gaccaagtttgtagggagtcaagtcaatgtgtctaaggacaactgcaagcaaccagataataacaaagtttttcagtatg tatggatgcagggagcactgacgagagacgctaacaataaaacgtcacgacagaatcattgtatgaaatcaacaacgctt tctgtagtcgcaaaatctccggcttttcttttagatgattatgattggaagtcgggggaatattctacgtggacggaatc tagttggcaagtcggtgcaatcagtatcaggatcttcttagtgccaagtaaacaattagaggtaacgactctaagtgtag gagtcgtgttactaattatatcacttgtctcaacatacctcatcaacaagaaagccaacattttatttggaatgtcacct ccgcattccaactaa |
|
| Transcript ID | pfu_aug2.0_3503.1_12475.t2 |
| Definition | - |
>pfu_aug2.0_3503.1_12475.t2 atgaaaaaattacgagttatctcccccaaaaaggaagaagaaatggacggtcttagtcagaggacattcggcctgttgat attcttattaatcattgaaatcggggaaggattgagaataagtaacaaaacttatatagaaatctctggtaaagcagcct gtatcaggagactaaacggcacacaccaagtggggtgtacatcgggaataaagggggacgtgggagttgtacattacata cagaattcctcagattttgattggttactccagaggggtcctgataaaccatacgctgtgttattacactcggaagattt cagcccggatagagtaagacagctatggtattctgggaaagtgaacggcatcatggtcatacacactacagatgacacag atctcacaccttttccctccactttctctcctgacaacacctgtccaggggatccatatggtctttaccatggcgacagt acctatggtaactgtaaacgacaggaatggaatccacagggaaacggcttgttttatgcagacttcagtttcccgatatt tatactgaccaataaatcggagatcagtgaaatcattaatacctgctatataaagttcaacaagcccctagaggatggtt ctccaagacctcaccccctctgtgctgtagaactgaaggctcgaatgtcaggcgccaaagattcggaaacctgcattcgt cgtacgaatactccgacgaatctcaacccagatacgtactgcgatcctttaggggataaaagcgtcgtcacgacgatgaa ggctacaacacagaatgaagatttaccagataattctattattatggctatagcaaggctggactcattttccttgtttg agaatatttatcccagtgcagacaaccatgttacaggaattgtgggattgctagctgcagcagaggctcttgggaaatat caggacgacttcatgaaaaatgacaccaaggatattatgtttgcctttctgaatggagaggcatttgactacattggttc tagcagagttatatatgatatgggtagagcggaattccctaccaaatataaagacggtcaaacacagctacacaacatca acttaaaaaagctacactccatcatggaagtcaatcaactcggacacagagatgacgggaaattgtggatgcatacagat ccactcagtggatttgtggccacacagattgaagaaatggtggatatcataaaaaatttaagcaacaatttgatagacag agctgatatcagtttgccccttcctcctgcgtcaactcagaggttcttgaaaaaaatggagaagaaaattccagctgtcg tcatcactgaccaccagagggcgttcacaaataagtattataacagcaggtttgacctagccagtacgatcgaggcagac ccaggtaacgtgactaacccagaggaagttgttacagagcaggcacggaaccttacactagcggcatctgctttagctaa atcactgtacagactagcaacgggattggatcctcctcagaacatggaggcagatcagtcaacagtcagtcagctgttgt attgcttccttcagtctccgtactgtgaattatttcgtcaaatagtatcaccagatgatgacagcacactcaagaaaaag gcagagtcaggtccctatcctttctacgtcagcgtcgacacggtagacaatcatgtgacctcacttactaaacgactgat gaccaagtttgtagggagtcaagtcaatgtgtctaaggacaactgcaagcaaccagataataacaaagtttttcagtatg tatggatgcagggagcactgacgagagacgctaacaataaaacgtcacgacagaatcattgtatgaaatcaacaacgctt tctgtagtcgcaaaatctccggcttttcttttagatgattatgattggaagtcgggggaatattctacgtggacggaatc tagttggcaagtcggtgcaatcagtatcaggatcttcttagtgccaagtaaacaattagagaccaccatactgtcagtag gcgtggtcatcactctggtttccatggtgcttgtctattttttaaactctagagccgatatattgttcgcccatccacgg ccctcaagacgttattaa |
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Protein
| Protein ID | pfu_aug2.0_3503.1_12475.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3503.1_12475.t1 MKKLRVISPKKEEEMDGLSQRTFGLLIFLLIIEIGEGLRISNKTYIEISGKAACIRRLNGTHQVGCTSGIKGDVGVVHYI QNSSDFDWLLQRGPDKPYAVLLHSEDFSPDRVRQLWYSGKVNGIMVIHTTDDTDLTPFPSTFSPDNTCPGDPYGLYHGDS TYGNCKRQEWNPQGNGLFYADFSFPIFILTNKSEISEIINTCYIKFNKPLEDGSPRPHPLCAVELKARMSGAKDSETCIR RTNTPTNLNPDTYCDPLGDKSVVTTMKATTQNEDLPDNSIIMAIARLDSFSLFENIYPSADNHVTGIVGLLAAAEALGKY QDDFMKNDTKDIMFAFLNGEAFDYIGSSRVIYDMGRAEFPTKYKDGQTQLHNINLKKLHSIMEVNQLGHRDDGKLWMHTD PLSGFVATQIEEMVDIIKNLSNNLIDRADISLPLPPASTQRFLKKMEKKIPAVVITDHQRAFTNKYYNSRFDLASTIEAD PGNVTNPEEVVTEQARNLTLAASALAKSLYRLATGLDPPQNMEADQSTVSQLLYCFLQSPYCELFRQIVSPDDDSTLKKK AESGPYPFYVSVDTVDNHVTSLTKRLMTKFVGSQVNVSKDNCKQPDNNKVFQYVWMQGALTRDANNKTSRQNHCMKSTTL SVVAKSPAFLLDDYDWKSGEYSTWTESSWQVGAISIRIFLVPSKQLEVTTLSVGVVLLIISLVSTYLINKKANILFGMSP PHSN |
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| Protein ID | pfu_aug2.0_3503.1_12475.t2 |
| Definition | - |
>pfu_aug2.0_3503.1_12475.t2 MKKLRVISPKKEEEMDGLSQRTFGLLIFLLIIEIGEGLRISNKTYIEISGKAACIRRLNGTHQVGCTSGIKGDVGVVHYI QNSSDFDWLLQRGPDKPYAVLLHSEDFSPDRVRQLWYSGKVNGIMVIHTTDDTDLTPFPSTFSPDNTCPGDPYGLYHGDS TYGNCKRQEWNPQGNGLFYADFSFPIFILTNKSEISEIINTCYIKFNKPLEDGSPRPHPLCAVELKARMSGAKDSETCIR RTNTPTNLNPDTYCDPLGDKSVVTTMKATTQNEDLPDNSIIMAIARLDSFSLFENIYPSADNHVTGIVGLLAAAEALGKY QDDFMKNDTKDIMFAFLNGEAFDYIGSSRVIYDMGRAEFPTKYKDGQTQLHNINLKKLHSIMEVNQLGHRDDGKLWMHTD PLSGFVATQIEEMVDIIKNLSNNLIDRADISLPLPPASTQRFLKKMEKKIPAVVITDHQRAFTNKYYNSRFDLASTIEAD PGNVTNPEEVVTEQARNLTLAASALAKSLYRLATGLDPPQNMEADQSTVSQLLYCFLQSPYCELFRQIVSPDDDSTLKKK AESGPYPFYVSVDTVDNHVTSLTKRLMTKFVGSQVNVSKDNCKQPDNNKVFQYVWMQGALTRDANNKTSRQNHCMKSTTL SVVAKSPAFLLDDYDWKSGEYSTWTESSWQVGAISIRIFLVPSKQLETTILSVGVVITLVSMVLVYFLNSRADILFAHPR PSRRY |
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