Gene
| Gene Model ID | pfu_aug2.0_3510.1_02420 |
|---|---|
| Locus | scaffold3510.1 : 10672 ... 31235 : - |
| To GenomeBrowser | scaffold3510.1:10672..31235 |
| Genes list of scaffold | scaffold3510.1 |
| Synonym | pfu_aug1.0_80101.1_34913 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3510.1_02420.t1 | 5 | 1 | Lectin_C | 65 | 173 | 5.5e-07 | 30.1 | 1.5e-10 | 5.5e-07 | 30.1 |
| pfu_aug2.0_3510.1_02420.t1 | 5 | 2 | Lectin_C | 327 | 356 | 5.5e-07 | 30.1 | 3.8 | 14000.0 | -3.3 |
| pfu_aug2.0_3510.1_02420.t1 | 1 | 1 | Exo_endo_phos | 351 | 563 | 1.3e-07 | 31.7 | 6.8e-11 | 2.5e-07 | 30.8 |
| pfu_aug2.0_3510.1_02420.t1 | 2 | 1 | Exo_endo_phos_2 | 456 | 566 | 5.3e-16 | 58.3 | 1.4e-19 | 5.3e-16 | 58.3 |
| pfu_aug2.0_3510.1_02420.t1 | 5 | 3 | Lectin_C | 479 | 487 | 5.5e-07 | 30.1 | 2.1 | 7600.0 | -2.5 |
| pfu_aug2.0_3510.1_02420.t1 | 5 | 4 | Lectin_C | 573 | 593 | 5.5e-07 | 30.1 | 1.8 | 6600.0 | -2.3 |
| pfu_aug2.0_3510.1_02420.t1 | 2 | 2 | Exo_endo_phos_2 | 626 | 644 | 5.3e-16 | 58.3 | 0.26 | 980.0 | -0.7 |
| pfu_aug2.0_3510.1_02420.t1 | 5 | 5 | Lectin_C | 641 | 690 | 5.5e-07 | 30.1 | 0.3 | 1100.0 | 0.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3510.1_02420.t1 | gi|390344338|ref|XP_003726098.1| | PREDICTED: uncharacterized protein LOC100890271 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_3510.1_02420.t1 | gi|390363521|ref|XP_003730392.1| | 7.9874e-44 | |
| pfu_aug2.0_3510.1_02420.t1 | gi|390359773|ref|XP_003729561.1| | 2.0e-39 | |
| pfu_aug2.0_3510.1_02420.t1 | gi|156386729|ref|XP_001634064.1| | predicted protein [Nematostella vectensis] | 4.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_3510.1_02420.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3510.1_02420.t1 atggttttgcaatgtccggcaacggtgagattcgaacccacgacctatgggttcgtagtccaccgcgctaagcactacgc taccagcactacactcgatgactgtactgaagctgtagcgaagatatacattacaggttgttctagtggatggaaacaat accagaacaaatgctataaattctctgacaacaaactgacattcacagaagctggggcccattgtagtacatccggtggt aaacttgcagaaccgcaaacttcaggggaaaactccttcatagaacaacaaattagcgttatcccgaattcaaaagacgt ggactattttatcggcataacggatatattcgaacaagatgcctggctatatatttctacattgacccccgtcagaccgt acgtgtcgggatggaggtacggtgaaccaaataactacggaggacatcccgaagactgtgtattcatccgcggaggactg agtggttggttagacgggtcctgttatacagcaatgcactttagagtgcgcggctccaaatttcctgtagggtcgaaact aaagaaactaaagaaaggagagggtccccaacaacaaacggttgcagcacccacatcaatacactccataaaaatcacag atcagacaaacacaagagtgcgcggctccaaatttcctgtagggtcgaaactaaagaaactaaagaaaggagagggtccc caacaacaaacggttgcagcacccacatcaatacactccataaaaatcacagatcagacacacacacatccgccttattc acctgatcttgctccatcagacttttatctattcccaaaactgaaagcagctatttatggcacccactttccgtccgatg atgacgtcataattgcagtcctttctgatcacccactacgagctagtagtccaaaaaaccacccaagacttaactcaaca aagaatacctactccagcgtgaaatccaacaaaaccaggttatcaagcaacccatatgaaataccacaaaagaaaaatct tcggattatgtcagtaaactgtagaagtatcaaagaaaaaagtgcagaattcaaccttgccctgcattatctgaaaccag atattgtctgtggaacagaatcctggctaaagggcatcaaaccaggtcaaccaccaacacatgacgcaattaaatctagc gaaatattcccagagaactacaatatttaccgaaatgatagaggcaccctaggtggaggcgtattcataatggtagaaaa gtcgtttacatccatagaacaaacagaatatataacggattgcgaaattgaatgggtaaaagttaagacgcagaacaaca aagacgtgacaataggatcatattacatgccacacagagacagcaatcatatagaaggactaaaaacttcactagataag atcaacaataaaaacaacaacattatactaactggcgatttcaactgcccgaatataaactggaacaatcaaacagcaaa cacaccagatagggaaatacaacaagaactcgtcgatattacaagtgcaaatggactaacgcaaatacatgataaaccaa caagagagaacaacctcctagatctagtgtttgtgtcgaacccaacactagtaaagtcatcactaaacgtccctggaata tctgaccatgacatcattaccaccgattttgaaacaaaagttcaacaccaaaaaacaaaacccaggaaatgctacatgta caacaagacgaactgggaaaagatagagaaagatctaacagaactacaagaaattatatcagaagagatgaatataggaa aatcagtcaaccaattatgggacacattcaaaacatcactgttcaaaactatggataacaacatacctaacaaagagctg cgagcaaaacactccgtaccatggatcaaacataaacaaagaaagatcatcaaaagaaaacaacgcctatatagacaagc caagaagaccaaaaactggaacaattatagaagctttcaaaaagactgcaaaagaagcctcagacgtgcagaatgggact acgtaaactcaaacataatagacggcctcaacagtaacaatcctaaacccttctggaaatacgtaaaatctaaacgacag gactccggagggatagcaccacttaagaaaggcacagctttaatatcggacagtaaaggcaaagcagaaatactcttaag tcaatttaagtcgggagcggctccgaatttcctgtag |
|
Protein
| Protein ID | pfu_aug2.0_3510.1_02420.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3510.1_02420.t1 MVLQCPATVRFEPTTYGFVVHRAKHYATSTTLDDCTEAVAKIYITGCSSGWKQYQNKCYKFSDNKLTFTEAGAHCSTSGG KLAEPQTSGENSFIEQQISVIPNSKDVDYFIGITDIFEQDAWLYISTLTPVRPYVSGWRYGEPNNYGGHPEDCVFIRGGL SGWLDGSCYTAMHFRVRGSKFPVGSKLKKLKKGEGPQQQTVAAPTSIHSIKITDQTNTRVRGSKFPVGSKLKKLKKGEGP QQQTVAAPTSIHSIKITDQTHTHPPYSPDLAPSDFYLFPKLKAAIYGTHFPSDDDVIIAVLSDHPLRASSPKNHPRLNST KNTYSSVKSNKTRLSSNPYEIPQKKNLRIMSVNCRSIKEKSAEFNLALHYLKPDIVCGTESWLKGIKPGQPPTHDAIKSS EIFPENYNIYRNDRGTLGGGVFIMVEKSFTSIEQTEYITDCEIEWVKVKTQNNKDVTIGSYYMPHRDSNHIEGLKTSLDK INNKNNNIILTGDFNCPNINWNNQTANTPDREIQQELVDITSANGLTQIHDKPTRENNLLDLVFVSNPTLVKSSLNVPGI SDHDIITTDFETKVQHQKTKPRKCYMYNKTNWEKIEKDLTELQEIISEEMNIGKSVNQLWDTFKTSLFKTMDNNIPNKEL RAKHSVPWIKHKQRKIIKRKQRLYRQAKKTKNWNNYRSFQKDCKRSLRRAEWDYVNSNIIDGLNSNNPKPFWKYVKSKRQ DSGGIAPLKKGTALISDSKGKAEILLSQFKSGAAPNFL |
|