Gene
| Gene Model ID | pfu_aug2.0_352.1_07394 |
|---|---|
| Locus | scaffold352.1 : 160308 ... 163715 : - |
| To GenomeBrowser | scaffold352.1:160308..163715 |
| Genes list of scaffold | scaffold352.1 |
| Synonym | pfu_aug1.0_1060.1_65772 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pou class transcription factor 4 | GO:0003677 GO:0005622 GO:0006351 GO:0048513 GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_352.1_07394.t1 | 1 | 1 | Pou | 175 | 248 | 7.0e-39 | 131.3 | 3.89981e-42 | 1.4e-38 | 130.3 |
| pfu_aug2.0_352.1_07394.t1 | 1 | 1 | Homeobox | 267 | 323 | 3.6e-19 | 68.1 | 2.5e-22 | 9.1e-19 | 66.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_352.1_07394.t1 | gi|524878785|ref|XP_005096074.1| | PREDICTED: POU domain, class 3, transcription factor 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_352.1_07394.t1 | gi|676475045|ref|XP_009060345.1| | hypothetical protein LOTGIDRAFT_95198, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_352.1_07394.t1 | gi|671016065|ref|XP_008698846.1| | PREDICTED: POU domain, class 3, transcription factor 4 [Ursus maritimus] | 0.0 |
| pfu_aug2.0_352.1_07394.t1 | gi|488562001|ref|XP_004470724.1| | PREDICTED: POU domain, class 3, transcription factor 4 [Dasypus novemcinctus] | 0.0 |
| pfu_aug2.0_352.1_07394.t1 | gi|57112535|ref|XP_549108.1| | PREDICTED: POU domain, class 3, transcription factor 4 [Canis lupus familiaris] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_352.1_07394.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_352.1_07394.t1 atggctgcgagtgcgggactttatttatcgagtactccaccctcgttaaatacttccttggcggaccctactcacgggat gcagtgctctgtggcgcaacaacctcaatatttacatagaacggacttacaggaaatgaagtatatgccacctcaaatgc aaaatggacatcacttaggacacccgaacaatcattggccgattacgggcggtgattcctggaatatgccgcaacttcac gacatgcgaatggacatgcggacggacatacgtgatatgaaaccaaatcagggggcagacctcggtcaacatgctacgtt acatcaccgcggaccacaacaattacatccgtcacaagtatggcactctcatctggcctcgccacatatcaatggtgggg gtcaacttcagcaccctgggtacggggtacagctcaacggcatgctgtccccccaccaacccatgcatccgggcatgcgg gaccccgaacatgacctggaccagcatgccccctcggacgaggatgcgccttcttcagacgatctcgaaatattcgcaaa gcagtttaaacagagacgaataaaactaggatttacgcaagcagatgtgggacttgctttgggcactttgtatggtaacg tatttagtcagacaactatttgtagattcgaagctttgcagttaagttttaaaaatatgtgtaaactgaaaccattgctc caaaagtggcttgaagaagcggactcgaccacagggtcatctactagcatagacaaaattgcagcacaaggtagaaagcg aaagaagcgcactagtatagaagtgacagttaaaggcgctcttgagaatcattttgttaaacaacccaagccatccgccc aagaaattgctcagttagccgaccagcttcagttagaaaaggaagtagtgcgagtttggttctgcaacagacggcaaaaa gaaaaacgaatgactccgccgggtcctctcggaccaaatggagaactgctgatgcaagaaagtgatgaaaattctcgtgc cgatagcccgctttcgaacagaggaaacggaaatatgaatggttctgaacatggacttaacatggcggtgacgagttcac aaacattattatcgccaaattatcattctgtcggtccgattatgaatgctcatagccagcaaccgcaggctcatcatcat tataatgcacataatcattcaccgacgcactga |
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Protein
| Protein ID | pfu_aug2.0_352.1_07394.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_352.1_07394.t1 MAASAGLYLSSTPPSLNTSLADPTHGMQCSVAQQPQYLHRTDLQEMKYMPPQMQNGHHLGHPNNHWPITGGDSWNMPQLH DMRMDMRTDIRDMKPNQGADLGQHATLHHRGPQQLHPSQVWHSHLASPHINGGGQLQHPGYGVQLNGMLSPHQPMHPGMR DPEHDLDQHAPSDEDAPSSDDLEIFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLL QKWLEEADSTTGSSTSIDKIAAQGRKRKKRTSIEVTVKGALENHFVKQPKPSAQEIAQLADQLQLEKEVVRVWFCNRRQK EKRMTPPGPLGPNGELLMQESDENSRADSPLSNRGNGNMNGSEHGLNMAVTSSQTLLSPNYHSVGPIMNAHSQQPQAHHH YNAHNHSPTH |
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