Gene
| Gene Model ID | pfu_aug2.0_352.1_07396 |
|---|---|
| Locus | scaffold352.1 : 238294 ... 246285 : + |
| To GenomeBrowser | scaffold352.1:238294..246285 |
| Genes list of scaffold | scaffold352.1 |
| Synonym | pfu_aug1.0_29583.1_26475 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable u3 small nucleolar rna-associated protein 11 | GO:0009987 GO:0044424 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_352.1_07396.t1 | 1 | 1 | Utp11 | 13 | 254 | 0.0 | 235.9 | 0.0 | 0.0 | 235.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_352.1_07396.t1 | gi|632985220|ref|XP_007909557.1| | PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_352.1_07396.t1 | gi|410904413|ref|XP_003965686.1| | PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Takifugu rubripes] | 0.0 |
| pfu_aug2.0_352.1_07396.t1 | gi|395526556|ref|XP_003765428.1| | PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Sarcophilus harrisii] | 0.0 |
| pfu_aug2.0_352.1_07396.t1 | gi|676475048|ref|XP_009060346.1| | hypothetical protein LOTGIDRAFT_183370 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_352.1_07396.t1 | gi|675871236|ref|XP_009021178.1| | hypothetical protein HELRODRAFT_157327 [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_352.1_07396.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_352.1_07396.t1 atggcatctctgaaaaatgcaaacaaagccagggctagaagccacagagagaggggacaggtagaaagtagagctcatct tggtttcttagagaagaagaaagattataaagcacgagcagaggactaccaacgtaaacagaacacactcaagtttttga agaggaaagctttagatcgaaatccagatgaattctacttcaacatggttaagacacagaaaacggaaggagttcatcag gaaagggagagcactgagccagtccataccgaagccgaactgaaactaatgtattctcaagatcaacgatacattaatat gaagaggacttctgaactcaggaaaatagagagattaaagtcaagtctacatgttctggacagtgaaacaaagccgaaaa acaaacatactgtatttgtggattctgaaaaagaagctaaggattttgatgctgcaaaatatttcaacacccacccagct cttgtgaacaggacttataacagacctacgttagagactctggaaaaagatggaatgggtggagaccttgatgaaacaga tattgaggagatggtaagggaaagagacagtaaatacagtgagctcgccaaaagaatagaaagggaaaagcagctcaacg ttattcaccagaaaatggagacaaagaaacatcttatggacaaaaaggcaaagagaataaaaaccaaaggtgagacaaag acatcagctgctcaatacagatggtgttataaacggaaaagatga |
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Protein
| Protein ID | pfu_aug2.0_352.1_07396.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_352.1_07396.t1 MASLKNANKARARSHRERGQVESRAHLGFLEKKKDYKARAEDYQRKQNTLKFLKRKALDRNPDEFYFNMVKTQKTEGVHQ ERESTEPVHTEAELKLMYSQDQRYINMKRTSELRKIERLKSSLHVLDSETKPKNKHTVFVDSEKEAKDFDAAKYFNTHPA LVNRTYNRPTLETLEKDGMGGDLDETDIEEMVRERDSKYSELAKRIEREKQLNVIHQKMETKKHLMDKKAKRIKTKGETK TSAAQYRWCYKRKR |
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