Gene
| Gene Model ID | pfu_aug2.0_352.1_07397 |
|---|---|
| Locus | scaffold352.1 : 246729 ... 259333 : - |
| To GenomeBrowser | scaffold352.1:246729..259333 |
| Genes list of scaffold | scaffold352.1 |
| Synonym | pfu_aug1.0_3577.1_30453 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_352.1_07397.t1 | 3 | 1 | BIR | 22 | 83 | 5.2e-33 | 113.2 | 1.4e-14 | 2.1e-11 | 44.0 |
| pfu_aug2.0_352.1_07397.t1 | 3 | 1 | zf-C3HC4_3 | 54 | 65 | 1.7e-13 | 49.9 | 0.16 | 230.0 | 1.5 |
| pfu_aug2.0_352.1_07397.t1 | 4 | 1 | zf-C3HC4_2 | 56 | 69 | 1.7e-06 | 27.8 | 0.29 | 440.0 | 1.0 |
| pfu_aug2.0_352.1_07397.t1 | 3 | 2 | BIR | 147 | 210 | 5.2e-33 | 113.2 | 8.4e-24 | 1.2e-20 | 73.6 |
| pfu_aug2.0_352.1_07397.t1 | 3 | 2 | zf-C3HC4_3 | 169 | 186 | 1.7e-13 | 49.9 | 0.4 | 600.0 | 0.2 |
| pfu_aug2.0_352.1_07397.t1 | 4 | 2 | zf-C3HC4_2 | 173 | 182 | 1.7e-06 | 27.8 | 2.2 | 3300.0 | -1.8 |
| pfu_aug2.0_352.1_07397.t1 | 4 | 3 | zf-C3HC4_2 | 313 | 324 | 1.7e-06 | 27.8 | 2.0 | 3000.0 | -1.7 |
| pfu_aug2.0_352.1_07397.t1 | 3 | 3 | zf-C3HC4_3 | 372 | 413 | 1.7e-13 | 49.9 | 1.2e-16 | 1.7e-13 | 49.9 |
| pfu_aug2.0_352.1_07397.t1 | 4 | 4 | zf-C3HC4_2 | 374 | 408 | 1.7e-06 | 27.8 | 1.2e-09 | 1.7e-06 | 27.8 |
| pfu_aug2.0_352.1_07397.t1 | 3 | 3 | BIR | 404 | 414 | 5.2e-33 | 113.2 | 5.9 | 8700.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_352.1_07397.t1 | gi|719745573|ref|XP_010211130.1| | PREDICTED: baculoviral IAP repeat-containing protein 7 [Tinamus guttatus] | 0.0 |
| pfu_aug2.0_352.1_07397.t1 | gi|557277189|ref|XP_006021700.1| | PREDICTED: baculoviral IAP repeat-containing protein 7-A-like isoform X1 [Alligator sinensis] | 0.0 |
| pfu_aug2.0_352.1_07397.t1 | gi|340708908|ref|XP_003393059.1| | PREDICTED: baculoviral IAP repeat-containing protein 7 isoform X1 [Bombus terrestris] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_352.1_07397.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_352.1_07397.t1 atgcaggaactatttgtgaatcaaaacggttcatttcagacaaatctgagaaatgaacttataagattatctacgttttc ctcctttctgactacgtccactgtgtccctcctccgcctggcctccgcaggcttcagatacatgggccccggggaccaac tggaatgtgtgttctgtctgcaaactttccaggattggaaagatgaacagacacttcttcaaagacattggattgcgtca ccaaactgcatttctaaagaaaaatctgcaccaaaaatagaatctgatttatcagaaaccgacgaagaactgcagtcgcc tatctccgaatttggagaatcttataacaaaccagaggggggccatgttgagcagacagcgtccgtctgtacgtattctg gacagccacggttcaccaagtacgctattttttccgtccgtctgtcaacatatcgcaattgggtccttcttcaatctccg gagttgatgtcacaggcaggattctattttacaggatgtgaagatatggtaagatgtttttattgcggaggcggtctgtc caactgggaggctgaagacgacccatgggtggagcatgcgcactggttccctaactgtgcattcctcaaacaaaacaaag gaagtgatttcattcaaaatgtcagggagcttgttcaaagtcaagagtcacagcaggtgtcggaaacgcagtctcagaca gcagcgggagattccgatcatagcaaagaaacagaagacacaattgacagtccagctgtacagagcattcgtgaaatggg ttacaacattgaaaccgtgcaacaagctatagcagagtggtctaaagaaagcacaaacaaaccgacggcctcagatttga tgaatgtgattatggacatggaagaactcacagtcagcagttgtgctggccaaaacctcacaggcaacaattgtgccgaa cagaaattcccagtcagccattgcatggatcagataccagtatcgcagaaaagttctgacagcgtacgtctcaagaaatt agactcaatgtcagatgatgataatggtgacctgcagagcattagagaagaaaatcgaagacttaaagacttgaccatgt gcaaaatttgtatggagaataatattaacattgtatttttgccatgtggacatcttgcgtcttgcagtgagtgtgcacca gcaatgagacgatgtccagtatgcaggggtcacgttaaaggtacggtcaggacattcctaacgtga |
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Protein
| Protein ID | pfu_aug2.0_352.1_07397.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_352.1_07397.t1 MQELFVNQNGSFQTNLRNELIRLSTFSSFLTTSTVSLLRLASAGFRYMGPGDQLECVFCLQTFQDWKDEQTLLQRHWIAS PNCISKEKSAPKIESDLSETDEELQSPISEFGESYNKPEGGHVEQTASVCTYSGQPRFTKYAIFSVRLSTYRNWVLLQSP ELMSQAGFYFTGCEDMVRCFYCGGGLSNWEAEDDPWVEHAHWFPNCAFLKQNKGSDFIQNVRELVQSQESQQVSETQSQT AAGDSDHSKETEDTIDSPAVQSIREMGYNIETVQQAIAEWSKESTNKPTASDLMNVIMDMEELTVSSCAGQNLTGNNCAE QKFPVSHCMDQIPVSQKSSDSVRLKKLDSMSDDDNGDLQSIREENRRLKDLTMCKICMENNINIVFLPCGHLASCSECAP AMRRCPVCRGHVKGTVRTFLT |
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