Gene
| Gene Model ID | pfu_aug2.0_352.1_07399 |
|---|---|
| Locus | scaffold352.1 : 279144 ... 281257 : + |
| To GenomeBrowser | scaffold352.1:279144..281257 |
| Genes list of scaffold | scaffold352.1 |
| Synonym | pfu_aug1.0_10072.1_10067 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_352.1_07399.t1 | 1 | 1 | Ank_5 | 60 | 104 | 4.1e-07 | 30.0 | 8.9e-11 | 6.6e-07 | 29.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_352.1_07399.t1 | gi|758872161|ref|WP_043033114.1| | MULTISPECIES: hypothetical protein [Burkholderia cepacia complex] | 3.0e-17 |
| pfu_aug2.0_352.1_07399.t1 | gi|499324660|ref|WP_011015152.1| | ankyrin [Corynebacterium glutamicum] | 4.0e-15 |
| pfu_aug2.0_352.1_07399.t1 | gi|748479924|ref|XP_011117340.1| | hypothetical protein AOL_s00004g389 [Arthrobotrys oligospora ATCC 24927] | 7.0e-15 |
| pfu_aug2.0_352.1_07399.t1 | gi|748497735|ref|XP_011110003.1| | hypothetical protein H072_4043 [Dactylellina haptotyla CBS 200.50] | 2.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_352.1_07399.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_352.1_07399.t1 atggaagactacccaattatcgtttttgccacacaattaagggatgatcacgttcagagtatcgagaatgttgccagatt agcagaacaacatcaatggcaagacttaatcaaagtattgagggacagatatgacctaataaacatgtgctcacttccta aagatcaatccgatttacctaacctcacattacttactcctcttcaccatgctgtaataggtaaagctcccaaagaagtg ttcgaagaactgttgaaattgcatgcatcaagaacttacaaaaacaaagaaggactgacggcttacgatataggaaaaag caacggcctggatgaagatatcttgaaaatgatagaaatacccgaggagattcgtaagcaagagattgaaatcaaaaaca tggaggaaggacttcacaaacttatacttgacagagttgagcatttgatacaggagactggtatacaactcccacagttg tcctatctgtttgagttcggtagttttctctaccatgttccgttgatgtacgggtcgttctcagtaaagaaagcaaagaa ggacaaaggaattatggttgaaagttggagcagaatagttggcggaagcggacagcgtcacagaataaacaagaaaggaa agatcaaactgaaagctgagggatttatgtga |
|
Protein
| Protein ID | pfu_aug2.0_352.1_07399.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_352.1_07399.t1 MEDYPIIVFATQLRDDHVQSIENVARLAEQHQWQDLIKVLRDRYDLINMCSLPKDQSDLPNLTLLTPLHHAVIGKAPKEV FEELLKLHASRTYKNKEGLTAYDIGKSNGLDEDILKMIEIPEEIRKQEIEIKNMEEGLHKLILDRVEHLIQETGIQLPQL SYLFEFGSFLYHVPLMYGSFSVKKAKKDKGIMVESWSRIVGGSGQRHRINKKGKIKLKAEGFM |
|