Gene
| Gene Model ID | pfu_aug2.0_352.1_07400 |
|---|---|
| Locus | scaffold352.1 : 283218 ... 294023 : - |
| To GenomeBrowser | scaffold352.1:283218..294023 |
| Genes list of scaffold | scaffold352.1 |
| Synonym | pfu_aug1.0_286983.1_57632 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_352.1_07400.t1 | 2 | 1 | Ank_2 | 69 | 150 | 2.5e-08 | 34.1 | 9.1e-07 | 0.0013 | 18.9 |
| pfu_aug2.0_352.1_07400.t1 | 2 | 1 | Ank_5 | 96 | 136 | 4.8e-17 | 61.5 | 1.4e-10 | 2.1e-07 | 30.9 |
| pfu_aug2.0_352.1_07400.t1 | 3 | 1 | Ank | 96 | 126 | 6.5e-08 | 32.0 | 1.6e-05 | 0.023 | 14.4 |
| pfu_aug2.0_352.1_07400.t1 | 3 | 2 | Ank | 128 | 147 | 6.5e-08 | 32.0 | 5.7 | 8500.0 | -3.1 |
| pfu_aug2.0_352.1_07400.t1 | 2 | 2 | Ank_2 | 253 | 336 | 2.5e-08 | 34.1 | 8.1e-05 | 0.12 | 12.7 |
| pfu_aug2.0_352.1_07400.t1 | 2 | 2 | Ank_5 | 282 | 322 | 4.8e-17 | 61.5 | 1.1e-09 | 1.6e-06 | 28.1 |
| pfu_aug2.0_352.1_07400.t1 | 3 | 3 | Ank | 282 | 312 | 6.5e-08 | 32.0 | 2.1e-05 | 0.032 | 14.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_352.1_07400.t1 | gi|118469829|ref|YP_885657.1| | 5.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_352.1_07400.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_352.1_07400.t1 atgaaatacccgagactgataaacttcattcggcaatgcttgtcgagtagagtactatataaaagcaaggaaggaacata cgatttttctccaaggataatctacgactatcctatcacagttcacacatcgacggtgcacgacgatgctgctaaaagta ggcagcgggtagcagatcttggttacaagtaccaatggaaaaaattagtcaaggaattaaaaaagaatgaacatttgata aattcttgccttcttccagttgatgaaagtacttcacctcagatgtatacaccattacaccatgccgctttcggtaaagc accccagaatgtgttcaaagtgttgattaattttggtgcatcaaaatctctaaaaactgctgatggacaaacggcttatg atattgctaaaagaaaaggacttgatgaaaaagttctgaagatgatcgaagtgccacatgagatattagagaacgaaact gtcataaagaagatggaagtagggctgcataaagttatactagagagggttgagaaactggtaaaggagaacgggcaaca gcttccacaattgtcgtttctttatgagtttggtagctttttctaccctgtaccaggaatgtttactccacatatttgtc tgacattgataaggaacatgtgcgactatcacattacagtttatacatcgaccttgacagatgatgctgtttcaatcaca cagcgagtagcagatcttgcttataggtaccgatggacagaattagtcaaggagttgaaagagaatgcgcatttgataaa ttcttgccgtctacctgtcgatggaggtacttcacctaaaatgtttaccccattacaccaagccgcattcggtaaagcac cccagaatgtgttcgaagacttgattaagctgggtgcatcaaaatcccttaagactgccgatggacaaacagcttatgat attgctaaaagcaaagggcttgatgaaaaagttctaaagatgatagaagtgccacaagagatatcagaaaatgaagctgt tataaagaagatggaaggggggctgcataaagtaatactagaaagagctgaaaatctggtaaagaaaaacggacaacagt taccacagttgtcgtatctttatgagtttggtagcttttattaccctgtaccaggaatgtatgggggattttcagtttct atgaacggtgacgatggtgatgataactcggaagatgaagcaatgcccgacgacgatggtaaccaacaatcaaagaaaga tgagaaaacgtcagaatgtgcaggtgaagttaaagacagtgtcaggagtttaggaggggagaataacgtgaagaaaggtg ttgtagtagaaagctggtgtagagtagtaggtggtagcggacaacgtcatgaaatcgacgaggagggaaatgtaaaatta gttgatgagggattcgtgtaa |
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Protein
| Protein ID | pfu_aug2.0_352.1_07400.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_352.1_07400.t1 MKYPRLINFIRQCLSSRVLYKSKEGTYDFSPRIIYDYPITVHTSTVHDDAAKSRQRVADLGYKYQWKKLVKELKKNEHLI NSCLLPVDESTSPQMYTPLHHAAFGKAPQNVFKVLINFGASKSLKTADGQTAYDIAKRKGLDEKVLKMIEVPHEILENET VIKKMEVGLHKVILERVEKLVKENGQQLPQLSFLYEFGSFFYPVPGMFTPHICLTLIRNMCDYHITVYTSTLTDDAVSIT QRVADLAYRYRWTELVKELKENAHLINSCRLPVDGGTSPKMFTPLHQAAFGKAPQNVFEDLIKLGASKSLKTADGQTAYD IAKSKGLDEKVLKMIEVPQEISENEAVIKKMEGGLHKVILERAENLVKKNGQQLPQLSYLYEFGSFYYPVPGMYGGFSVS MNGDDGDDNSEDEAMPDDDGNQQSKKDEKTSECAGEVKDSVRSLGGENNVKKGVVVESWCRVVGGSGQRHEIDEEGNVKL VDEGFV |
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