Gene
| Gene Model ID | pfu_aug2.0_353.1_10646 |
|---|---|
| Locus | scaffold353.1 : 5256 ... 12145 : - |
| To GenomeBrowser | scaffold353.1:5256..12145 |
| Genes list of scaffold | scaffold353.1 |
| Synonym | pfu_aug1.0_243510.1_14296 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_353.1_10646.t1 | 2 | 1 | MFS_1 | 14 | 212 | 5.9e-28 | 97.5 | 7.5e-28 | 1.1e-23 | 83.5 |
| pfu_aug2.0_353.1_10646.t1 | 2 | 2 | MFS_1 | 301 | 402 | 5.9e-28 | 97.5 | 2.7e-08 | 0.0004 | 19.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_353.1_10646.t1 | gi|291239559|ref|XP_002739690.1| | PREDICTED: vesicular glutamate transporter 3-like [Saccoglossus kowalevskii] | 4.0e-33 |
| pfu_aug2.0_353.1_10646.t1 | gi|260815277|ref|XP_002602400.1| | hypothetical protein BRAFLDRAFT_274979 [Branchiostoma floridae] | 1.0e-32 |
| pfu_aug2.0_353.1_10646.t1 | gi|674051354|ref|XP_008831926.1| | PREDICTED: vesicular glutamate transporter 2, partial [Nannospalax galili] | 8.0e-32 |
| pfu_aug2.0_353.1_10646.t1 | gi|527264817|ref|XP_005150630.1| | PREDICTED: vesicular glutamate transporter 2 [Melopsittacus undulatus] | 2.0e-31 |
| pfu_aug2.0_353.1_10646.t1 | gi|657568943|ref|XP_008287928.1| | PREDICTED: vesicular glutamate transporter 2 [Stegastes partitus] | 2.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_353.1_10646.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_353.1_10646.t1 atgtacatgccccatcgatacattgtggtggtcctcggattttttggactgttgctctctgtaggttttagggccgtatt ctctatggtgatggtctatgtgctcagagaggaaaacactggctcgctacttttcttcaaagagtgcactattaacggca ccaagtgggacctacgccttgattgggatgtagcggtatcacagtattttaatacggcgtttttccttggttatgtggcc acacaattaccgggtggttacctcgccgcaaggatatcatcaaagtgggtgtttggtacagctgtactgaccagtagtgg actccttgttgttctcagtatgaccatcaggctcggcatccctggtgtcttcgtcattagaaccctacaaggacttgctg agggtgtctgcttgccagcgttcaatggcgtcatttccgcttgggctcccaagtcggagaaaactcgcatggtgacactt gcctattcaggtctctacctaagtccagcagtggcactttttgcatcaggggcgacaacttgttacatcagttggcattc cagtctatttatatatggtggactgggtgtagtctggtccatcgtctgggtgtcattcgtgcacgatactccagaaatgg atccaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctttctcccgaggaaaagcagatttacgaacaggagg gacatcaagtttcagccagttctgtacaaaagataggttttctgacctccgtaccagagatactgatgaccatagtagtg gtggtagggggcatcgtctttgacaaactaataaaatcacagactattagtaccacaactgccagaaaagtggcacaatg tacaggatttggagtggaatcactgtgtatatttttattagcgtttgtcaacaaccataccctagctatgttacttctct gtctgggtgtgggcatgagtggactcacaatatcaggttaccaggttaaccccttggacttggctcctcagtatgcccac gtcctcacggggatccccagacttggccgtttgggcaccgtattccgtagtcaagatgtgtataattag |
|
Protein
| Protein ID | pfu_aug2.0_353.1_10646.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_353.1_10646.t1 MYMPHRYIVVVLGFFGLLLSVGFRAVFSMVMVYVLREENTGSLLFFKECTINGTKWDLRLDWDVAVSQYFNTAFFLGYVA TQLPGGYLAARISSKWVFGTAVLTSSGLLVVLSMTIRLGIPGVFVIRTLQGLAEGVCLPAFNGVISAWAPKSEKTRMVTL AYSGLYLSPAVALFASGATTCYISWHSSLFIYGGLGVVWSIVWVSFVHDTPEMDPXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPEEKQIYEQEGHQVSASSVQKIGFLTSVPEILMTIVV VVGGIVFDKLIKSQTISTTTARKVAQCTGFGVESLCIFLLAFVNNHTLAMLLLCLGVGMSGLTISGYQVNPLDLAPQYAH VLTGIPRLGRLGTVFRSQDVYN |
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