Gene
| Gene Model ID | pfu_aug2.0_353.1_10649 |
|---|---|
| Locus | scaffold353.1 : 29651 ... 42125 : - |
| To GenomeBrowser | scaffold353.1:29651..42125 |
| Genes list of scaffold | scaffold353.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_353.1_10649.t1 | 3 | 1 | Ig_3 | 32 | 116 | 3.4e-17 | 62.7 | 7.9e-06 | 0.015 | 15.8 |
| pfu_aug2.0_353.1_10649.t1 | 3 | 1 | Ig_2 | 33 | 130 | 1.6e-26 | 92.2 | 1.3e-08 | 2.5e-05 | 24.3 |
| pfu_aug2.0_353.1_10649.t1 | 3 | 1 | I-set | 37 | 117 | 3.6e-34 | 116.4 | 9.6e-10 | 1.8e-06 | 27.7 |
| pfu_aug2.0_353.1_10649.t1 | 3 | 1 | V-set | 41 | 118 | 3.8e-20 | 71.8 | 6.1e-09 | 1.1e-05 | 25.2 |
| pfu_aug2.0_353.1_10649.t1 | 3 | 1 | ig | 47 | 115 | 1.1e-13 | 51.1 | 0.00012 | 0.23 | 11.6 |
| pfu_aug2.0_353.1_10649.t1 | 3 | 2 | Ig_2 | 141 | 224 | 1.6e-26 | 92.2 | 2.8e-14 | 5.1e-11 | 42.5 |
| pfu_aug2.0_353.1_10649.t1 | 3 | 2 | V-set | 143 | 211 | 3.8e-20 | 71.8 | 5.5e-07 | 0.001 | 18.9 |
| pfu_aug2.0_353.1_10649.t1 | 3 | 2 | I-set | 144 | 222 | 3.6e-34 | 116.4 | 2.4e-16 | 4.4e-13 | 48.8 |
| pfu_aug2.0_353.1_10649.t1 | 3 | 2 | Ig_3 | 145 | 210 | 3.4e-17 | 62.7 | 6.0e-09 | 1.1e-05 | 25.8 |
| pfu_aug2.0_353.1_10649.t1 | 3 | 2 | ig | 150 | 208 | 1.1e-13 | 51.1 | 7.9e-09 | 1.5e-05 | 25.0 |
| pfu_aug2.0_353.1_10649.t1 | 3 | 3 | I-set | 229 | 320 | 3.6e-34 | 116.4 | 2.0e-12 | 3.7e-09 | 36.3 |
| pfu_aug2.0_353.1_10649.t1 | 3 | 3 | V-set | 237 | 319 | 3.8e-20 | 71.8 | 3.5e-08 | 6.4e-05 | 22.8 |
| pfu_aug2.0_353.1_10649.t1 | 3 | 3 | Ig_2 | 242 | 314 | 1.6e-26 | 92.2 | 8.9e-08 | 0.00017 | 21.6 |
| pfu_aug2.0_353.1_10649.t1 | 3 | 3 | ig | 244 | 309 | 1.1e-13 | 51.1 | 0.0001 | 0.19 | 11.8 |
| pfu_aug2.0_353.1_10649.t1 | 3 | 3 | Ig_3 | 245 | 311 | 3.4e-17 | 62.7 | 4.4e-06 | 0.0081 | 16.6 |
Transcript
| Transcript ID | pfu_aug2.0_353.1_10649.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_353.1_10649.t1 atgccaagtatgagaccaataatgtcatcgttatggattccttactttaccgtagttttggctgcactggacaataccat cagtgaccagataaagcccatttttaacgtcagtgagatcaacgttacggccatagcgggtagcacggctatattacctt gttccgtaatcaacattggcgacaagagggtagcctggctgaatcccagaaagactttaatagccacagaggacaggcgt acaatggacgacacaagactgtctattgagagacctctaataccggattggaatttacatatccgatccgtgcgttatga agaccggggaatgtatacatgcacactgaatactgatcccgtcagtgtcaaacgaatatttctaacagttttagtaccac cagacattgatgaattacattcaagtggaagacaaactgttagggagggatcaacagtagagttacaatgcaacgcaact ggaaaaccacaaccaaaaataaaatggttcagaaagacaatttacagtggaagggaaagaaaagaagttattggagatcc aggtgacacacttaaaattcataatataacaagatattgtgacgggatttacgaatgcgtggcgtctaacggagtaggac gagccgtatctaaggacatccaagtagatgtattatacaaaccagaagttagagttcttacaaaaaaaattaaacaaaaa cttgggaaagagactatactaagttgtaccatagccgcatccccacaaggtatgggaatctggcgaaggggaaataccgt tttaccagttcgatctcagtctaagcatagattggagttatataatgatggacctaatcaagtgacactcaacttgaaga tattgtatgtacaagaggaggattatggtgaatacacgtgtgaggccagtaacaaactaggcaaggactgggagaatatg tacctctttgaattgaaggatcctagaacaacgactcttgctgttacaccccgacagtctaataaacaacaatacattga tgttatggtccctcctatacaaacctccacagcagtggtccaacagaatccacaatacggtatacacagcatgtcaaatt cagattctttggaaatgggatccagtgcaatcagaaatccaagttcttccagcgtattattcatactaagtttacattgc tttaatctgatatttctcaagagactcatttga |
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Protein
| Protein ID | pfu_aug2.0_353.1_10649.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_353.1_10649.t1 MPSMRPIMSSLWIPYFTVVLAALDNTISDQIKPIFNVSEINVTAIAGSTAILPCSVINIGDKRVAWLNPRKTLIATEDRR TMDDTRLSIERPLIPDWNLHIRSVRYEDRGMYTCTLNTDPVSVKRIFLTVLVPPDIDELHSSGRQTVREGSTVELQCNAT GKPQPKIKWFRKTIYSGRERKEVIGDPGDTLKIHNITRYCDGIYECVASNGVGRAVSKDIQVDVLYKPEVRVLTKKIKQK LGKETILSCTIAASPQGMGIWRRGNTVLPVRSQSKHRLELYNDGPNQVTLNLKILYVQEEDYGEYTCEASNKLGKDWENM YLFELKDPRTTTLAVTPRQSNKQQYIDVMVPPIQTSTAVVQQNPQYGIHSMSNSDSLEMGSSAIRNPSSSSVLFILSLHC FNLIFLKRLI |
|