Gene
| Gene Model ID | pfu_aug2.0_353.1_10653 |
|---|---|
| Locus | scaffold353.1 : 123996 ... 138211 : + |
| To GenomeBrowser | scaffold353.1:123996..138211 |
| Genes list of scaffold | scaffold353.1 |
| Synonym | pfu_aug1.0_2204.1_01008 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_353.1_10653.t1 | 16 | 1 | SRCR | 2 | 77 | 0.0 | 720.5 | 2.8e-11 | 5.2e-08 | 33.1 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 1 | SRCR_2 | 3 | 32 | 3.3e-39 | 133.0 | 0.032 | 59.0 | 4.0 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 2 | SRCR | 113 | 196 | 0.0 | 720.5 | 6.6e-17 | 1.2e-13 | 51.1 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 2 | SRCR_2 | 120 | 147 | 3.3e-39 | 133.0 | 0.00043 | 0.8 | 9.9 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 3 | SRCR | 213 | 300 | 0.0 | 720.5 | 1.6e-20 | 2.9e-17 | 62.8 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 3 | SRCR_2 | 225 | 254 | 3.3e-39 | 133.0 | 2.5e-05 | 0.046 | 13.9 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 4 | SRCR | 316 | 402 | 0.0 | 720.5 | 9.6e-19 | 1.8e-15 | 57.0 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 4 | SRCR_2 | 321 | 352 | 3.3e-39 | 133.0 | 1.0e-05 | 0.019 | 15.1 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 5 | SRCR | 421 | 509 | 0.0 | 720.5 | 3.2e-18 | 5.9e-15 | 55.4 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 5 | SRCR_2 | 433 | 455 | 3.3e-39 | 133.0 | 0.049 | 90.0 | 3.4 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 6 | SRCR | 520 | 599 | 0.0 | 720.5 | 5.9e-17 | 1.1e-13 | 51.3 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 6 | SRCR_2 | 530 | 561 | 3.3e-39 | 133.0 | 3.4e-06 | 0.0063 | 16.7 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 7 | SRCR | 611 | 697 | 0.0 | 720.5 | 5.1e-16 | 9.4e-13 | 48.3 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 7 | SRCR_2 | 619 | 690 | 3.3e-39 | 133.0 | 1.1e-06 | 0.0021 | 18.2 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 8 | SRCR | 713 | 807 | 0.0 | 720.5 | 3.2e-15 | 6.0e-12 | 45.7 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 8 | SRCR_2 | 729 | 745 | 3.3e-39 | 133.0 | 0.13 | 250.0 | 1.9 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 9 | SRCR | 819 | 895 | 0.0 | 720.5 | 1.9e-16 | 3.6e-13 | 49.6 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 9 | SRCR_2 | 834 | 856 | 3.3e-39 | 133.0 | 0.12 | 220.0 | 2.1 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 10 | SRCR | 911 | 998 | 0.0 | 720.5 | 9.2e-15 | 1.7e-11 | 44.3 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 10 | SRCR_2 | 918 | 1000 | 3.3e-39 | 133.0 | 5.8e-08 | 0.00011 | 22.3 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 11 | SRCR | 1018 | 1105 | 0.0 | 720.5 | 1.9e-10 | 3.6e-07 | 30.4 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 11 | SRCR_2 | 1031 | 1051 | 3.3e-39 | 133.0 | 0.037 | 69.0 | 3.7 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 12 | SRCR | 1108 | 1190 | 0.0 | 720.5 | 1.7e-07 | 0.00031 | 21.0 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 12 | SRCR_2 | 1126 | 1142 | 3.3e-39 | 133.0 | 0.82 | 1500.0 | -0.6 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 13 | SRCR | 1217 | 1309 | 0.0 | 720.5 | 1.9e-15 | 3.6e-12 | 46.4 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 13 | SRCR_2 | 1225 | 1254 | 3.3e-39 | 133.0 | 0.0001 | 0.19 | 12.0 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 14 | SRCR | 1331 | 1419 | 0.0 | 720.5 | 3.0e-21 | 5.6e-18 | 65.1 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 14 | SRCR_2 | 1342 | 1367 | 3.3e-39 | 133.0 | 0.00018 | 0.33 | 11.2 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 15 | SRCR | 1437 | 1531 | 0.0 | 720.5 | 2.6e-22 | 4.9e-19 | 68.5 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 15 | SRCR_2 | 1447 | 1473 | 3.3e-39 | 133.0 | 0.00072 | 1.3 | 9.2 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 16 | SRCR | 1542 | 1633 | 0.0 | 720.5 | 1.2e-15 | 2.2e-12 | 47.1 |
| pfu_aug2.0_353.1_10653.t1 | 16 | 16 | SRCR_2 | 1554 | 1634 | 3.3e-39 | 133.0 | 4.4e-07 | 0.00082 | 19.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_353.1_10653.t1 | gi|701418653|ref|XP_010000081.1| | PREDICTED: deleted in malignant brain tumors 1 protein [Chaetura pelagica] | 0.0 |
| pfu_aug2.0_353.1_10653.t1 | gi|390334402|ref|XP_788358.3| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_353.1_10653.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_353.1_10653.t1 atgaatggcacatggaagacgctatgtgcctggccaaagtttggagatggagatgctactgttgcatgccgggaactggg atactccagggggtcgatgctaccgttagctgcttttggtacattttctgctgaatacaccgcacctttcaaaggatgta gtggacaggagacgagtttttctgcctgcaattttgacgaaaattatactcctaatgtctgtgggactcaaaatacctat tacggctcaatttggtgcactaatgaaacagtaacagatctcgggctcagtgtcgaaatattgcccgttgatgaaagcaa tacaacgagaagctttggaccaacgagaatatccgctagaggacaagtaggtcagatatgtacatcctactggagtgagg aggacgccaatgtcacgtgctctgagctggggtatcgtggaggggtgaccacggtataccctgccaccgactctgaacct ttccttctgactggtattcagtgtacaggatcagagagacgactggcagattgttatacagaggtacagatatgttatga ttctggtcttagagctggagtagtctgctttgatcgatcagaaccagtcgtacatcttgaatttaaagagaatgattatg gtcgcgtcatcatagaagttgacggccggaatggtacaatttgtaacgatcagttcaactctctggatgctgaggttgtc tgtagacagatgggttacgtcacaggtgctgaaatgcatggcccccatatgccaataaacttgccgtatgtgctggctaa cgtacaatgtaccggttcagaaacgtctattttatcatgtaagagtgacggttgggacatggacaacaactgtacgtcag gagaggccgcggtattctgttacgacagcgttaggatagcattaggtcaaactaatgacgaggtgtccatggggctagtg gaggtataccaagacaggttctggacaacactatgtagtacagagttcgacaagaacgacgctgacgtagtgtgtagaca actaggatatcccaagtccaaagtcctactccctgggatatttggaagaccctaccatgctctgtatacaacgtccatac gctgtcatggcaacgaaacgtccttgttagactgcccccacttgataggaagctgtagatcttatgactatgccactata atctgtatcaaagatatggtttctgacgatatgagtttatcattggataatgacgttggaggtcgggtgattgccacaca gtacggtataaggggtacggtgtgcaggacgggctgggacaacagggacgctagggttgtgtgtaggatgtacaattacc agggtggacaagtatacggtacacaggaagtcaccaacagataccgacctgtttgggtatccgatgtgcagtgtagtgga caagagcaggatgcgttccagtgcaacatgaactttaacgtcaccccggagtgtggtacagacaaactcgacgccggtgt catctgctacaacggatcaggaatgtcaatcagacttgttggcgggagtaattcaaacgagggccgtgtggaggtgtcac gtgatggacaatggggtaccatttgtgacaatagttggacgacgtatgacgcgcacgttgtgtgtagacaggtggggttc gccgggggagacgctagacgaggatcacaggaaacaatatttgagtgttctaacctcggctggaacgtggctgcgacaac atgctccgctcatactaaagatgctggtgtatactgctatccttgggagcgtctgtcaatggtgtactttggagctttgg agttctggatggacaatagatacggtgcggtatgtgccgatactttcaatgacaacgcggcagctgtagtgtgtagagcg ttaggataccagtatgttgtccgtctgtgctgctcagccgtgggggatattggattggactatagccttataggagtcaa ctgtaggggtaacgaaacatccttacaccaatgccctaaactaagacaacaaacagaatgcaacagtggctacgccgctg tgttctgcacaaggaacaatcctcagttctcaagcatttcctcacgtataccaagtaatggccgtggattggtccagctg aattacatatacaaagatggctacgtatgtgctgaaaatttcactgacgctgacgccagggttgtttgtagggagagtaa ttatccatacgctttggctatacgtcataatacatcagactttggacacacgtacgagatacgctggacaaacggtcttg gttgtgacggtcaagaaactcgcgtttcagaatgtcctgcgttacgtattggcgagttgggacagtgcaatcagaaatta tcggctggagttctgtgctcaataagttcccagacatttgacgtcagacttcaaaacggcacaagcggcagagaaggtcg cgtggagctgttagtgaacggaatctggggctccttgtgtaccagtgaactgaccgacaacgaggcaagggtcatctgca agcagttgaataaacgagatggtgtagctttaagtgctggtcatttcggcaacacaggatcggccatgtttgattccttg acgtgtagcggtgacgagagtgacatacttgactgtgtggtgtctgtggcatcatcaggtgttcgacttgtggaatcgga cattattgagtttggacgccttgaaatgtggcatgaatcttcttggacgccagtttgtgacgccatgtttaatgatactg aagcaagtgttgtgtgtcgataccttgggtacgccactggcaaaagtgtatgctgctcagccttaggcgcgctaaccatt gacaagcaaatagaaatatcaagactgagttgcacgggaacagagtctaatccacaattctgcagtaaggagactaatgc atgcagtagcagaaactacgcatccgtgtactgcatgacgtcggttaagactgacaatgccacgctgacgtttcctggga ccgtgccatacggagctctgactgttaaccgccacggacttgagggtcatatttgcctcgatggttttgatgacaccgat gctacaatcgcatgtgaatcgcttaattatgggcatggccggaaaataaaagtgatgcagagaagacgctacccaatcat aatggggcaggtggtttgtccacaagctatctcggagttcaaattctgtcagtacaatacgtttggtacagatccaatgt gtacatcgtctgacgatgtcgccggggctatatgttataataatggttctgttaagctacaagtcgacaccagaaccctt tactttgatgcctccaacttcactgatttctctgccaagctcttgtgtacggatttgggctatgctgggggtgaggctgt ccatggaacatacaggacgtcgggtgccatcgccatgtactgtgatggtacggagacgtcaattcttgattgtatgggga actgggacttgccagaggtgacgtccaaaacggttgcttacgtcaaatgtcacagggaagtcaagtacctaaagatgata tccatctttttggttgatgtaattacagtgcgcattgtgaatgggggacaaagctacggtgcagtagaactctacaaaga ggatgcgtgggggacagtttgtccaaagacattcgacagcgtagccgcaggtatagtgtgtagcagtcttggctatacat ccggtatacctgtatgctgttccacattcggcagtgtacaggtccctccgactgtccgacgcttgtcctgtggagggaca gagtcgagtctctctgactgtaacatggactttgacatcagtggggtacaatgtgacaacgactggggatatgcttcggt cgcttgcttgaacggaaatatgccgtcagatttctctgtaagcattagggaccagcgttatttcggtgacgtcattttga catacatgaacattccggggcgaatatgccaggatggttgggacgacaaagacgcgcaggttgtgtgtcgtcagctcaat tacgtcacaggaaaagcgtatggatactatgtggaggaggggacgacatctggtgggccgtattggatgactgaagtttc ttgctccggttcagagaggtcattgtcagaatgtggctacagcagacttgggtccgtgacagaatgccagtcaagacatt atgctggagttctgtgttttgacaaccaaggtttatattaccgaatatcaggaggagatccgaatggacgttctgggagg gttgagttgtttctaaatagtgtatgggggacagtatgtgacacatattgggatggccctgatgcgcgcgcattatgtaa atattttgggtataaagagggcgatccatacacaggaagttacagggtacccactactctgtctagtatatatgaaacta actacggatgtacagggaatgaagcttctataagtgaatgtccacatagcggatggttccagactacgtcaccgagatgc ttagatcataagaatgatgctggtgtattctgttacgaaaacgttaagatttacggcggcgttggaagagagaagacaga gggtccggtgttgatatacatggaaaacacctggtaccttatgtgtgataacaactttgatgacacggcggccgctgtag tctgtcgtcagcttggctttgctgatgggtattctaagtgttgcgatgcccatggtagcatttctgttcctgtatggaga aataacacatttaactgtagggacagttctcaatcagtagatgactgtttgatagaccaagaatgcaagtcagaggcgta cgcatcggtgatgtgttctaccacacaactaccacctagaaccactacatcaaaaacaactacgcagagtataaccaaag taacattagcccagacgtctagtgataacgtgacggttatagtcgccgttatcgtatcatgttgtgttttactgatcgtt gtcatcattgtggttgcagtgttcttgaaatgcaggaacacaacaggaacgaaaggcgtctacaacgaggctgttctaca acgtaaagcagacggttcatttcatgcacaaaatcccttacatgacatcaatattgacaatgacgatgaagcacgtgttc atatagatagacagggtagtgtcgttgaatattccccaacacctaaagtcgatgttccccaatcctactctaacttttta tatgaatctccgggtacatctaacgcaaaaggtgcaacagccatagaagacgtttcaatagaacatgacgacaaaaagcc ttttgcggatgtcattggtattgaccactcaggttatgaagttataaatccttcatttaggtctccagacgtttcgcaca aatacgattcgttgaaaaaacgggacaatttacgggactcgctggctgagtccaaagaaatagaatctccaacaacttga |
|
Protein
| Protein ID | pfu_aug2.0_353.1_10653.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_353.1_10653.t1 MNGTWKTLCAWPKFGDGDATVACRELGYSRGSMLPLAAFGTFSAEYTAPFKGCSGQETSFSACNFDENYTPNVCGTQNTY YGSIWCTNETVTDLGLSVEILPVDESNTTRSFGPTRISARGQVGQICTSYWSEEDANVTCSELGYRGGVTTVYPATDSEP FLLTGIQCTGSERRLADCYTEVQICYDSGLRAGVVCFDRSEPVVHLEFKENDYGRVIIEVDGRNGTICNDQFNSLDAEVV CRQMGYVTGAEMHGPHMPINLPYVLANVQCTGSETSILSCKSDGWDMDNNCTSGEAAVFCYDSVRIALGQTNDEVSMGLV EVYQDRFWTTLCSTEFDKNDADVVCRQLGYPKSKVLLPGIFGRPYHALYTTSIRCHGNETSLLDCPHLIGSCRSYDYATI ICIKDMVSDDMSLSLDNDVGGRVIATQYGIRGTVCRTGWDNRDARVVCRMYNYQGGQVYGTQEVTNRYRPVWVSDVQCSG QEQDAFQCNMNFNVTPECGTDKLDAGVICYNGSGMSIRLVGGSNSNEGRVEVSRDGQWGTICDNSWTTYDAHVVCRQVGF AGGDARRGSQETIFECSNLGWNVAATTCSAHTKDAGVYCYPWERLSMVYFGALEFWMDNRYGAVCADTFNDNAAAVVCRA LGYQYVVRLCCSAVGDIGLDYSLIGVNCRGNETSLHQCPKLRQQTECNSGYAAVFCTRNNPQFSSISSRIPSNGRGLVQL NYIYKDGYVCAENFTDADARVVCRESNYPYALAIRHNTSDFGHTYEIRWTNGLGCDGQETRVSECPALRIGELGQCNQKL SAGVLCSISSQTFDVRLQNGTSGREGRVELLVNGIWGSLCTSELTDNEARVICKQLNKRDGVALSAGHFGNTGSAMFDSL TCSGDESDILDCVVSVASSGVRLVESDIIEFGRLEMWHESSWTPVCDAMFNDTEASVVCRYLGYATGKSVCCSALGALTI DKQIEISRLSCTGTESNPQFCSKETNACSSRNYASVYCMTSVKTDNATLTFPGTVPYGALTVNRHGLEGHICLDGFDDTD ATIACESLNYGHGRKIKVMQRRRYPIIMGQVVCPQAISEFKFCQYNTFGTDPMCTSSDDVAGAICYNNGSVKLQVDTRTL YFDASNFTDFSAKLLCTDLGYAGGEAVHGTYRTSGAIAMYCDGTETSILDCMGNWDLPEVTSKTVAYVKCHREVKYLKMI SIFLVDVITVRIVNGGQSYGAVELYKEDAWGTVCPKTFDSVAAGIVCSSLGYTSGIPVCCSTFGSVQVPPTVRRLSCGGT ESSLSDCNMDFDISGVQCDNDWGYASVACLNGNMPSDFSVSIRDQRYFGDVILTYMNIPGRICQDGWDDKDAQVVCRQLN YVTGKAYGYYVEEGTTSGGPYWMTEVSCSGSERSLSECGYSRLGSVTECQSRHYAGVLCFDNQGLYYRISGGDPNGRSGR VELFLNSVWGTVCDTYWDGPDARALCKYFGYKEGDPYTGSYRVPTTLSSIYETNYGCTGNEASISECPHSGWFQTTSPRC LDHKNDAGVFCYENVKIYGGVGREKTEGPVLIYMENTWYLMCDNNFDDTAAAVVCRQLGFADGYSKCCDAHGSISVPVWR NNTFNCRDSSQSVDDCLIDQECKSEAYASVMCSTTQLPPRTTTSKTTTQSITKVTLAQTSSDNVTVIVAVIVSCCVLLIV VIIVVAVFLKCRNTTGTKGVYNEAVLQRKADGSFHAQNPLHDINIDNDDEARVHIDRQGSVVEYSPTPKVDVPQSYSNFL YESPGTSNAKGATAIEDVSIEHDDKKPFADVIGIDHSGYEVINPSFRSPDVSHKYDSLKKRDNLRDSLAESKEIESPTT |
|