Gene
| Gene Model ID | pfu_aug2.0_353.1_10654 |
|---|---|
| Locus | scaffold353.1 : 139196 ... 153509 : + |
| To GenomeBrowser | scaffold353.1:139196..153509 |
| Genes list of scaffold | scaffold353.1 |
| Synonym | pfu_aug1.0_11933.1_53760 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_353.1_10654.t1 | 3 | 1 | CBM_4_9 | 20 | 161 | 5.0e-15 | 55.6 | 9.7e-17 | 3.6e-13 | 49.6 |
| pfu_aug2.0_353.1_10654.t1 | 2 | 1 | Glyco_hydro_10 | 220 | 263 | 4.9e-21 | 75.0 | 0.29 | 1100.0 | -1.7 |
| pfu_aug2.0_353.1_10654.t1 | 3 | 2 | CBM_4_9 | 281 | 327 | 5.0e-15 | 55.6 | 0.00013 | 0.47 | 10.4 |
| pfu_aug2.0_353.1_10654.t1 | 2 | 2 | Glyco_hydro_10 | 428 | 584 | 4.9e-21 | 75.0 | 4.6e-24 | 1.7e-20 | 73.2 |
| pfu_aug2.0_353.1_10654.t1 | 3 | 3 | CBM_4_9 | 576 | 621 | 5.0e-15 | 55.6 | 1.5 | 5600.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_353.1_10654.t1 | gi|524889156|ref|XP_005101139.1| | PREDICTED: uncharacterized protein LOC101860746 [Aplysia californica] | 0.0 |
| pfu_aug2.0_353.1_10654.t1 | gi|524889152|ref|XP_005101137.1| | PREDICTED: uncharacterized protein LOC101860256 [Aplysia californica] | 0.0 |
| pfu_aug2.0_353.1_10654.t1 | gi|676479381|ref|XP_009061730.1| | hypothetical protein LOTGIDRAFT_127603 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_353.1_10654.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_353.1_10654.t1 atgctcctatctacacttgttttagtcttcctctcatcgaggtttcattctgtgaatggtaacttgtttaagaatcctga ttttgaggatgccaacaatgtcctagactggggacatgcatggggttattcccaaaccatcctgacgacatcgacagcca agtctgcagctagctacatgaaagttactaacagaacacagaattggcaaggacctggacaacttgtgacaatgaccact aacacagactataatattagctgctggttccgactactgaatcacaatacaaggattttccagaaaatcaaatggtcctt agctttccaatgggaaaagtcgtccaatcaaaagtcgtattacgatgttgccgagaggagtatgcagagagtcagcggtg attggatgttgcttagtggagatttcaccacaccttcaaggccatggtatcaagtgaatgtgtacatccagggaccagat cctggaatagaatttttgattgacgatgcttcccttactgctataacacctaatgcgtactggaaatcagaggcaaatca aagaatagaacatttgcgcaaaagcaattttacccttaacgtagacatccctgctgaatatgaccctttacacgtggaac ttgagataaatctgaagaatcacgagttcggattcggaagtgttgtccaagacaatcacatcctggacaaacagtactca acaggatatcagaacatcttctacgagttctttaactgggccaccgttggatccttcaagtggaaatataatagaggatc gttttatagtttattcatcaaatgccttacagcatatatatccaatcaaaagtcgtattacgatattgccgagaggagta tgcagagagtcagcggtgattggatgttgctgagtggagatttcaccacaccttcaaggccatggtatcaagttaatgtg tacatccaagggccagatcctggaatagattttttgattgacgatgcttcccttacttctattacacctaatgcgaactg gaaatcagaggcaaatcaaagaatagaacaattgcgcaaaagcaattttacccttaacgtagacatccctgctgaatatg accctttacatgtggaacttgagattaatctgaagaatcacgagttcggatttggaagtgttgtccaagacaatcacatc ctggacaaacagtactcaacaggatatcagaacatcttttacgagttcttcaactgggccaccgttggatccttcaagtg gaaatataatagaggatcgttagatcattgggatatcaacaatgaactgctgcatggacaggagtttgaggagatcacgg gtgacccagagtactcaatgaagatatacaacaaagtacacgctgctgatccgcatccgaaactctttctaaatgagtat gacgtggtcgccgtgggcgcattgacaaggggatatctggaacaagctttagagttcaagaagaagtctcatcttgatgc aattggagtgcaaagtcactttagggattacacggcacctgaccctactgtcatcaagagtcgtctagatcttctagcag gagcaggcctgcccatttgggttactgaactgactttgaccaataaagacgagcatgcgcgcgcagactggattgaagat gcactgaggacttactttagtcatccatctgttcatggagtgattttctggggtttctgggacgaaggtgggaatgtaga tggagctcttgtaaacggaaattacttcagtatcaatcaagcaggaacaagatatctgcagcttgtaaagcaagaatgga gtactcatgtcaagaaacaaatgacgaagcatcaagagatcattcctatgcgagggtttaaaggagattacgagatcata gtgcgatataacagaaaaccgattatgcttcaacatttccagaatagccaaagtaccgatacggtgcacgtcgatattcc atctggcaaccatgttatagctctgccaaccgctagaccgacaagtgtccctgtaacccatgttcaccacgtatcaacga caggaaaacactctgtaggtcaggctgcgtcacgtgctagtacccagaatcttcagtgtgtgactcgctactcatcttac tcacagattggtgatgataagtcgacatctgttggatgcatgaatgacgaaattctgacatcatgctccatgcttaccaa ggatttgttacattttcgggacggggaaaagatcactgtcaactctggaaaagtaatgtgtacggcagtgaatgcttggc gatcaagtgcacctgttcaggcgatagcaaggtgctgtaaaagggaaaacctacagtgtaactactacgtggcgggacca tcggggaataaaccggacgaccaaattaaagttgcgtgctcgaataatcagtttgctacaggctgtacatcctacaccta tttcggggccttggatggatcattcagtgcaaatgattcctgtgtggcacaaaacgacggtactgatggtggtaggttgg aggatgcatag |
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Protein
| Protein ID | pfu_aug2.0_353.1_10654.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_353.1_10654.t1 MLLSTLVLVFLSSRFHSVNGNLFKNPDFEDANNVLDWGHAWGYSQTILTTSTAKSAASYMKVTNRTQNWQGPGQLVTMTT NTDYNISCWFRLLNHNTRIFQKIKWSLAFQWEKSSNQKSYYDVAERSMQRVSGDWMLLSGDFTTPSRPWYQVNVYIQGPD PGIEFLIDDASLTAITPNAYWKSEANQRIEHLRKSNFTLNVDIPAEYDPLHVELEINLKNHEFGFGSVVQDNHILDKQYS TGYQNIFYEFFNWATVGSFKWKYNRGSFYSLFIKCLTAYISNQKSYYDIAERSMQRVSGDWMLLSGDFTTPSRPWYQVNV YIQGPDPGIDFLIDDASLTSITPNANWKSEANQRIEQLRKSNFTLNVDIPAEYDPLHVELEINLKNHEFGFGSVVQDNHI LDKQYSTGYQNIFYEFFNWATVGSFKWKYNRGSLDHWDINNELLHGQEFEEITGDPEYSMKIYNKVHAADPHPKLFLNEY DVVAVGALTRGYLEQALEFKKKSHLDAIGVQSHFRDYTAPDPTVIKSRLDLLAGAGLPIWVTELTLTNKDEHARADWIED ALRTYFSHPSVHGVIFWGFWDEGGNVDGALVNGNYFSINQAGTRYLQLVKQEWSTHVKKQMTKHQEIIPMRGFKGDYEII VRYNRKPIMLQHFQNSQSTDTVHVDIPSGNHVIALPTARPTSVPVTHVHHVSTTGKHSVGQAASRASTQNLQCVTRYSSY SQIGDDKSTSVGCMNDEILTSCSMLTKDLLHFRDGEKITVNSGKVMCTAVNAWRSSAPVQAIARCCKRENLQCNYYVAGP SGNKPDDQIKVACSNNQFATGCTSYTYFGALDGSFSANDSCVAQNDGTDGGRLEDA |
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