Gene
| Gene Model ID | pfu_aug2.0_353.1_10657 |
|---|---|
| Locus | scaffold353.1 : 195563 ... 205527 : + |
| To GenomeBrowser | scaffold353.1:195563..205527 |
| Genes list of scaffold | scaffold353.1 |
| Synonym | pfu_aug1.0_35062.1_40956 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_353.1_10657.t1 | 1 | 1 | LINES_N | 82 | 299 | 1.1e-24 | 87.3 | 2.5e-28 | 3.7e-24 | 85.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_353.1_10657.t1 | gi|260799112|ref|XP_002594541.1| | hypothetical protein BRAFLDRAFT_104462 [Branchiostoma floridae] | 3.0e-14 |
| pfu_aug2.0_353.1_10657.t1 | gi|676438978|ref|XP_009048706.1| | hypothetical protein LOTGIDRAFT_157866 [Lottia gigantea] | 4.0e-14 |
| pfu_aug2.0_353.1_10657.t1 | gi|655886432|ref|XP_008246986.1| | PREDICTED: protein Lines homolog [Oryctolagus cuniculus] | 5.0e-14 |
| pfu_aug2.0_353.1_10657.t1 | gi|556958723|ref|XP_005990207.1| | PREDICTED: protein Lines homolog [Latimeria chalumnae] | 2.0e-13 |
| pfu_aug2.0_353.1_10657.t1 | gi|641802223|ref|XP_008163692.1| | PREDICTED: protein Lines homolog isoform X2 [Chrysemys picta bellii] | 4.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_353.1_10657.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_353.1_10657.t1 atgtatgaatcctgtatacttagagaatttgaactccagacctgctgggaaactaagcttatttaccttgagattacatc agatattgtacaagcttctaaaggaaataatttaaatgactggttagaaatactgtactcccattggtcagtaatatgtt cagatgtcttcaaagtgctgtgtaacacctgggaagtcagtgatagtactccagatagatcaactaatgtcagatctgag tcagataatgatacctgtgatgtacaatctcaggatgttttgaactggcttaagaaagcatcatttgatagtttacccta tagtgaagagaaaggctttggtggtgaaatgacaatttttcctaaaagtgagaatgagaaagaatctaaaggcaaagaaa gcagaccagataattgtgaaggtggtcagaggaatgaagtcagaggtttagaagttacaccatcaatgacacagctacgt agtttgtctttactaatctttaagactgcagcaacactggcacggtttgattctgaagactgccaactatcaactgtttt aaacgtgatgaagaaactggatgcgtttatcagcaaattttattcctcagacttcaattggatacatgaagtatttctag atcaagatgacagttggattgaggcattactagcactgttagatacttacatatattttcaaaagaggcataccatggtg gttgatacagacaaagttttgagcatttgtccacacagacagtttgtatggttcctacactgtacagggtttgaccatag tattgtagtggatctactcatctcacctgaaacctgcttcctcctctatctcaccaaatatctgaaggttattacagtag aatggctcagccttatggaaacacactcaataatggaaaaacagctcaaagaatcaacacaggacgtatcaacgaacaac tgtacattaccaccaaggactgatacagatgtcaagaggtcaaactgtgaaacaggtcattttgattttgatgtaaaaat gccaagaacagagaacatacccatggatgagtctggatctgggattttttatgatgaaaacaagggatgcatcaataata cttcagcagatgtaaaatctgcgaataaggctgtcagcttggcacttttcgatgataatggaagtactgaagtccaagat actttggcacttttcgatgataatggaagtactgaagtccaagatacttttggttcttcaaactcaaaaaccatagcaga atatattgaatctgatacaaacagttcttctgctgaaaacattggtttttgtattaactctgaatttgatagttccagta gaacgaccaagttaactgttagtaaatgtaatgttagtggtttatctctacttgcttcttataatgatgatgaagattca gaggaagatgatgatgagagtgattatagagatgatagtagtgatgatagtagcatcagagatgattaccttcatcaaac tgatgatagtgtaatgtttcatcacccatgcaaggttgactctttattagacaaaaccatggcagtgttgattagaactc gactgaaactggaggagtttgcattgacaggagaactaacatataactgcaaacctttggtagacctaatagagggatgt gaacatctatatgaacatgattaa |
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Protein
| Protein ID | pfu_aug2.0_353.1_10657.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_353.1_10657.t1 MYESCILREFELQTCWETKLIYLEITSDIVQASKGNNLNDWLEILYSHWSVICSDVFKVLCNTWEVSDSTPDRSTNVRSE SDNDTCDVQSQDVLNWLKKASFDSLPYSEEKGFGGEMTIFPKSENEKESKGKESRPDNCEGGQRNEVRGLEVTPSMTQLR SLSLLIFKTAATLARFDSEDCQLSTVLNVMKKLDAFISKFYSSDFNWIHEVFLDQDDSWIEALLALLDTYIYFQKRHTMV VDTDKVLSICPHRQFVWFLHCTGFDHSIVVDLLISPETCFLLYLTKYLKVITVEWLSLMETHSIMEKQLKESTQDVSTNN CTLPPRTDTDVKRSNCETGHFDFDVKMPRTENIPMDESGSGIFYDENKGCINNTSADVKSANKAVSLALFDDNGSTEVQD TLALFDDNGSTEVQDTFGSSNSKTIAEYIESDTNSSSAENIGFCINSEFDSSSRTTKLTVSKCNVSGLSLLASYNDDEDS EEDDDESDYRDDSSDDSSIRDDYLHQTDDSVMFHHPCKVDSLLDKTMAVLIRTRLKLEEFALTGELTYNCKPLVDLIEGC EHLYEHD |
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