Gene
| Gene Model ID | pfu_aug2.0_353.1_10661 |
|---|---|
| Locus | scaffold353.1 : 269531 ... 279732 : - |
| To GenomeBrowser | scaffold353.1:269531..279732 |
| Genes list of scaffold | scaffold353.1 |
| Synonym | pfu_aug1.0_4389.1_23561 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_353.1_10661.t1 | 9 | 1 | zf-C2H2 | 269 | 289 | 2.4e-09 | 36.9 | 4.2e-05 | 0.089 | 13.1 |
| pfu_aug2.0_353.1_10661.t1 | 9 | 2 | zf-C2H2 | 295 | 313 | 2.4e-09 | 36.9 | 7.0 | 15000.0 | -4.7 |
| pfu_aug2.0_353.1_10661.t1 | 9 | 3 | zf-C2H2 | 354 | 376 | 2.4e-09 | 36.9 | 1.6e-05 | 0.034 | 14.4 |
| pfu_aug2.0_353.1_10661.t1 | 9 | 4 | zf-C2H2 | 381 | 403 | 2.4e-09 | 36.9 | 4.2e-06 | 0.009 | 16.3 |
| pfu_aug2.0_353.1_10661.t1 | 9 | 5 | zf-C2H2 | 411 | 431 | 2.4e-09 | 36.9 | 0.05 | 110.0 | 3.5 |
| pfu_aug2.0_353.1_10661.t1 | 9 | 6 | zf-C2H2 | 436 | 457 | 2.4e-09 | 36.9 | 0.0032 | 6.7 | 7.2 |
| pfu_aug2.0_353.1_10661.t1 | 9 | 7 | zf-C2H2 | 468 | 490 | 2.4e-09 | 36.9 | 5.3e-08 | 0.00011 | 22.2 |
| pfu_aug2.0_353.1_10661.t1 | 9 | 8 | zf-C2H2 | 498 | 517 | 2.4e-09 | 36.9 | 0.039 | 83.0 | 3.8 |
| pfu_aug2.0_353.1_10661.t1 | 9 | 9 | zf-C2H2 | 534 | 545 | 2.4e-09 | 36.9 | 0.024 | 51.0 | 4.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_353.1_10661.t1 | gi|557331918|ref|XP_006038787.1| | PREDICTED: zinc finger protein 835-like [Alligator sinensis] | 6.0e-23 |
| pfu_aug2.0_353.1_10661.t1 | gi|584067507|ref|XP_006754151.1| | PREDICTED: zinc finger protein 77 [Myotis davidii] | 4.0e-22 |
| pfu_aug2.0_353.1_10661.t1 | gi|555982254|ref|XP_005903034.1| | PREDICTED: zinc finger protein 84 [Bos mutus] | 4.0e-22 |
| pfu_aug2.0_353.1_10661.t1 | gi|688586623|ref|XP_009289648.1| | PREDICTED: zinc finger protein OZF [Danio rerio] | 4.0e-22 |
| pfu_aug2.0_353.1_10661.t1 | gi|554528127|ref|XP_005858879.1| | PREDICTED: zinc finger protein 77 isoform X1 [Myotis brandtii] | 6.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_353.1_10661.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_353.1_10661.t1 atggtttcctcaacatttatcaagttttcatccaagcttgaagaaataaaaaccctatttggtcttctgacagcaattga aaagattgatggattgaagcacctcactgccacactcaacttcctacagcgtgtgaattatggcacagatcatggaggga ttccagaacttgtagtgcatgatggaagtgaaagaaataatgttcattttatggatacacctgtctcagacattccagct ggagccagtttagacagttgtacagtacaaaatggaagcagctgtcaaggacaaaaggtcagtgttaagctaaaggatac acatggaacctttgactttccagctgagaagagtgaaggcacttcacctgaatgcagcagtacgatatgttataatgcac aggcaaagcagaaagtctcgacaagaaagaggaagcagactgagccaaggcgggcgagcgagaaaccgttggttagcaaa aacaattttaaagaggctgtcgcagatttttctggtaccagaaaatcaagcagacttcagaattcaaaaattagtacttt cagcagagatgaatcagaggacagcctcgatgattttgataaaaacagtgcaaaaccagaaatgggacaaccgaaaactt atgtctcagaattaacaacaaagtcagacaacaagaaagtaaaagagttaaagacttgtgcaacaaagaagtaccaaatt tcaagaaagttactcagaaaagcttttaagagtaaaggatccaagtttgttggttcaagaaaggtgaaatcacacagtaa tttttgctctaaatgtggaaagcattttcctagcttagatctgtatctacagcatacagttctccatggtgacaccccaa tgtcttgcttgtcatgccatcaggtgtgtttgaacagaactcaaatggacagtcataaatgtaaaaaatctactcaaaga ctcaggtttgctaaagtcggtaaaaatggtgactctaagcttcagaaacactctaactacagttggaatgtgaaaaggtg gagtacacatcctaaaaatcatacatgtcagtactgtggaaaggcatttcgaagtaagggattcctattttctcattaca agcatcatgcacggggaatgcacatatgtcaggcatgtggacggtttttcagtaccaccacagaatacagacagcacata caaactcatcaaggagagtctgcgtttttatgtttgagatgtggaatgaagtataatgcaggggaatactatgataaaca ctacagtcaccataaaacctgtgactgcaatttatgtacatttacatgtgatgaccaacagcaactgagaggtcatatac ttactgaccacaatataagatgggacgggcagccattatcctataaatgtgaagagtgtggtgagaagttctccagacgt agccttttggagattcacaataagcaacacatggattgtaagccaatagaatgccagccatgtcaactatactttacttc aaaaaagtctctcgatattcacaagatgagttaccgacattccctgaaaacaggagaggtggtgaatgatgagaaaaaat acttatgtagtgtttgtggaaagacttacttcagatcattatcacggggatttatcacacttcctggtagcatgatggta cgacagtttatgtacatattctttagtaccatcatgcaagcgggaagaacaataaatccatgtgatcattatatatag |
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Protein
| Protein ID | pfu_aug2.0_353.1_10661.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_353.1_10661.t1 MVSSTFIKFSSKLEEIKTLFGLLTAIEKIDGLKHLTATLNFLQRVNYGTDHGGIPELVVHDGSERNNVHFMDTPVSDIPA GASLDSCTVQNGSSCQGQKVSVKLKDTHGTFDFPAEKSEGTSPECSSTICYNAQAKQKVSTRKRKQTEPRRASEKPLVSK NNFKEAVADFSGTRKSSRLQNSKISTFSRDESEDSLDDFDKNSAKPEMGQPKTYVSELTTKSDNKKVKELKTCATKKYQI SRKLLRKAFKSKGSKFVGSRKVKSHSNFCSKCGKHFPSLDLYLQHTVLHGDTPMSCLSCHQVCLNRTQMDSHKCKKSTQR LRFAKVGKNGDSKLQKHSNYSWNVKRWSTHPKNHTCQYCGKAFRSKGFLFSHYKHHARGMHICQACGRFFSTTTEYRQHI QTHQGESAFLCLRCGMKYNAGEYYDKHYSHHKTCDCNLCTFTCDDQQQLRGHILTDHNIRWDGQPLSYKCEECGEKFSRR SLLEIHNKQHMDCKPIECQPCQLYFTSKKSLDIHKMSYRHSLKTGEVVNDEKKYLCSVCGKTYFRSLSRGFITLPGSMMV RQFMYIFFSTIMQAGRTINPCDHYI |
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