Gene
| Gene Model ID | pfu_aug2.0_353.1_10663 |
|---|---|
| Locus | scaffold353.1 : 305102 ... 313682 : - |
| To GenomeBrowser | scaffold353.1:305102..313682 |
| Genes list of scaffold | scaffold353.1 |
| Synonym | pfu_aug1.0_4389.1_23563 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_353.1_10663.t1 | 2 | 1 | Neugrin | 79 | 262 | 6.6e-14 | 52.2 | 8.9e-18 | 6.6e-14 | 52.2 |
| pfu_aug2.0_353.1_10663.t1 | 2 | 2 | Neugrin | 393 | 453 | 6.6e-14 | 52.2 | 0.13 | 980.0 | -0.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_353.1_10663.t1 | gi|524908094|ref|XP_005109154.1| | PREDICTED: uncharacterized protein LOC101853351 [Aplysia californica] | 5.0e-12 |
| pfu_aug2.0_353.1_10663.t1 | gi|676439212|ref|XP_009048783.1| | hypothetical protein LOTGIDRAFT_157951 [Lottia gigantea] | 6.0e-09 |
| pfu_aug2.0_353.1_10663.t1 | gi|391336545|ref|XP_003742640.1| | PREDICTED: uncharacterized protein LOC100906408 [Metaseiulus occidentalis] | 5.0e-08 |
| pfu_aug2.0_353.1_10663.t1 | gi|241570584|ref|XP_002402815.1| | conserved hypothetical protein [Ixodes scapularis] | 6.0e-08 |
| pfu_aug2.0_353.1_10663.t1 | gi|291225765|ref|XP_002732867.1| | PREDICTED: neugrin-like [Saccoglossus kowalevskii] | 8.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_353.1_10663.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_353.1_10663.t1 atggcacagcacttaacttatttcgcagatagttcaatagagcagaacgttgcttttagtgcaagactgtcaagagacgt tggtgacttgggaaaatcacagccaatagtatgtgatcaagttctgacgaatattgggggaagaattagcaaagacgatg gagataggagatttttgaaaaggaagatattagaaaagaaattaagaaataagtttctacgagagtataacttgctgaca tggaatgccaaacaacagatgcagtatttgaataaagaatttccagatgagtggactgtagaaagactagcagagagttt tcctgtcagtgaatttggagtcgcacaaattcttaaatcaaagatcaagatgagaacaaaagaagacgttaatattcatg acatgaagctagaaaatgcaaatggaaattctaatttgccgtttccatctttaccagaactgcctagagaagacgaactt agtactataaatagcaacagtatgaggcttgaagcaggtatgtttgaatcatatctgatgagaatgtctgaaaaaacaca agcgagcaaaagtagtatttgtcatggaagtagacaagataaaagactaccagggatgaaggaaggcctgaaaatgttga ctgggtctttgatggaagaagctgccaagaaaggtttgaacaacgagacatataaaagaaaattaggcaaacagggtcaa aatgcactcacgaatacgaaagagacacacaatacgaataagaaagagacacacaatattaactttgatacttctcaaaa agatatgattggtagaggttccctcaaacagggtgttagtgatgctcgaagataccaaacaattgatgctgcttttgatt tagatgacagtaaagattttgcaaaaccaacacaaagaagagaccctacaagcaagaaaactaatagcatagaaaaaaat atatctcaccaagaactggtgggagaagaatcccccaaacaggttgtaagaaaagttacaaaatacaaagcactaagtgc tgcttttggtttagatgacaatgaagattttgcaaagccaacacgaagaggagaaattacaagtaagagacctgatacta caaaagacctggcaacaaaatctcttaaatctcaaacactagatacaaccatggaattattgagcattcaggacaacagc actctgtctgatagcacaagcaaatcctatacatcactgaattcaaattatcagggttctcctgtacaaaacagtagaca gccgaggacacctgactctgagaaagccatatcagtcaaccaaccagatgctcatgttgaagtaaaagcagacaaattga tggatattgatgacaatttagtaaacactttaatgagagagcaagtaatgaatgataaagatgtagctttgagaagacgt caaagaaaacgcatagagaaactgaaagatgattggaacacatcatcgccacatttctacgaaaaacttcaaatgcacga aacatttatgatacagaaaccaacgatgaatgcaacaagttctacaagaaatgaccattattccgaatcaaacaaagtat ttgaaaggaagatcgattttaataccaatgaaaaccgtaacttcacctcgggaaagcagcctacatttcaaaacagacta agcagcaactgggacagaaattttagagaggatgagtattacgatggtaagaagcaaaaggaattttcagtttatggaaa ccggaaaataaaatctgcagaacagagagactttgaggaaaaattatcgtatgagaatataataacagctggtaaaagag gatctgataaacaacacattgtaaaacatccttactattatgatccagtgaccggctaccaaaatccatacggaaagttt gtcaaagaggatcgtgtcctgtggaagaggcaagataatatgaagaagggaaaatattataaaaaggatgatactgttta tgacagtgatggtgaaatactgtttaaagtacccaaangattttttttaaatacagtgaaaatatactaa |
|
Protein
| Protein ID | pfu_aug2.0_353.1_10663.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_353.1_10663.t1 MAQHLTYFADSSIEQNVAFSARLSRDVGDLGKSQPIVCDQVLTNIGGRISKDDGDRRFLKRKILEKKLRNKFLREYNLLT WNAKQQMQYLNKEFPDEWTVERLAESFPVSEFGVAQILKSKIKMRTKEDVNIHDMKLENANGNSNLPFPSLPELPREDEL STINSNSMRLEAGMFESYLMRMSEKTQASKSSICHGSRQDKRLPGMKEGLKMLTGSLMEEAAKKGLNNETYKRKLGKQGQ NALTNTKETHNTNKKETHNINFDTSQKDMIGRGSLKQGVSDARRYQTIDAAFDLDDSKDFAKPTQRRDPTSKKTNSIEKN ISHQELVGEESPKQVVRKVTKYKALSAAFGLDDNEDFAKPTRRGEITSKRPDTTKDLATKSLKSQTLDTTMELLSIQDNS TLSDSTSKSYTSLNSNYQGSPVQNSRQPRTPDSEKAISVNQPDAHVEVKADKLMDIDDNLVNTLMREQVMNDKDVALRRR QRKRIEKLKDDWNTSSPHFYEKLQMHETFMIQKPTMNATSSTRNDHYSESNKVFERKIDFNTNENRNFTSGKQPTFQNRL SSNWDRNFREDEYYDGKKQKEFSVYGNRKIKSAEQRDFEEKLSYENIITAGKRGSDKQHIVKHPYYYDPVTGYQNPYGKF VKEDRVLWKRQDNMKKGKYYKKDDTVYDSDGEILFKVPKXFFLNTVKIY |
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