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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_353.1_10664
Locus scaffold353.1 : 318433 ... 325376 : +
To GenomeBrowser scaffold353.1:318433..325376
Genes list of scaffold scaffold353.1
Synonym pfu_aug1.0_1052.1_07781

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_353.1_10664.t1 2 1 Cu_amine_oxid 242 279 0.0 299.5 0.31 2300.0 -3.1
pfu_aug2.0_353.1_10664.t1 2 2 Cu_amine_oxid 313 677 0.0 299.5 0.0 0.0 299.2

Transcript
Transcript IDpfu_aug2.0_353.1_10664.t1
Definition-
>pfu_aug2.0_353.1_10664.t1
atgttcaaggtcaccaagatggacaccatcaagttcaatcacctcctatcgtgcttaatcacattttcagtcatcataaa
acaagcaagtggccaaaattgtatgataaattcagttctctgtacattcgacctatccgatcctgtcgacccaccagtgt
tccatgatttgacgaaagcagagataaagtcagttcagaactatctttacagtcagccacatctacgtcttattcatccc
aagcatgctaatatcagtaccagctttatattcggtatggaggtgttcctgccacctaaacgcgatgtccttcagtacat
gaattctatcatacctattgataaacccccacgtgctgctcttgtgaccattttccgaggagacatatttccaccagcag
tagaggagcatattgtatttcctttaccttggccaactcagcatcgactacacaggtccataccatatcatttacgaccc
tattcaactatcgagtttctcaaaatttctgattttctggccagatcagcagacagagttcttcggcaaataatgttaga
aatgttcgacggaagaacaataggatgtggaaacaagtgtttaggtttcttctttgtatctgcaatgggtcccaccgtaa
ctaaaatccctgatgccaggaagacgtggtattggatgcaccaaatcgtggagttttctatgttaaatcctgtagatttt
gctattcttcttaatgaaaatgatggcatgtatgcaatcgaaaaagtctatttcaacaatatgtatttcagttcattaaa
cgaatttgcaattcattatcagaacccaacattccccaaaataagagtgccttttccaacggacaatgattttgtgttct
caagaccacaaagaagagggcaccttttcccggatgttccagtaagtccaccaagacaagttgaaccagagggaaagcga
tactgtgtaagacatcaagaagtaaaatacatgaattggaaattcaattttcgtttatccccatcccaaggtccacgcat
atataatgtgagataccttgataagttaatagtatatgaactagctctccaggacatagctgtcttctactcgggagccg
agcctcaacataagtacgctaacttcttcgactcttcattcctaattggagcaaaccttgaaggaatggtaccgggcgtc
gactgtcctacgggagctacatttatagatacccatgtcgtagtcggaaattcaataaagcctttaaagttaagaaatgc
gttttgtgtcttcgagcaaaataccggggacccacttagaagacatatgtcaacaaaatatggatatggcgtatttttcg
aaggggctccaagcaacgttttaattttacgaacaattgtgacaatatcgaattatgattataccgtagactttatcttt
catcagaatggtgttttgcagactaaagttgtacctacaggatttattctaccatctatgttcacaaaaaacaactggag
taaatacggattcagactgaacaataagttggtcgggaatctacatcaccatgctttcaacttcaaagtggatatagata
ttaatggacagcacaatagatatgagacactggatatcgtcccagacgaaaccaaccatccgtcatccagtgaccccttc
gacgtctggtatcagagcagaattaggagatctgttaagaaaacagaagcagagtctcttctcaagtttaatttcgatca
accaaagtaccatatattctacaataacaacataaagtctccggaggggaacgatatggcataccgattggtaaacaagg
gtatgtctaagtcaatactgccagaaggcatcggtaatgagggaacaggtgcatggatgcgatatcaattggcggtcaca
agaaggaaagaaacagaaccgaccagttcatcagtgtattcggcatttggttcctacaacccagtagtcaacttcaaaac
cttttattctgataacgagaatattcttgataaggtgtatagacggaagcgcaataagacatttatacatagactgtag

Protein
Protein IDpfu_aug2.0_353.1_10664.t1
Definition-
>pfu_aug2.0_353.1_10664.t1
MFKVTKMDTIKFNHLLSCLITFSVIIKQASGQNCMINSVLCTFDLSDPVDPPVFHDLTKAEIKSVQNYLYSQPHLRLIHP
KHANISTSFIFGMEVFLPPKRDVLQYMNSIIPIDKPPRAALVTIFRGDIFPPAVEEHIVFPLPWPTQHRLHRSIPYHLRP
YSTIEFLKISDFLARSADRVLRQIMLEMFDGRTIGCGNKCLGFFFVSAMGPTVTKIPDARKTWYWMHQIVEFSMLNPVDF
AILLNENDGMYAIEKVYFNNMYFSSLNEFAIHYQNPTFPKIRVPFPTDNDFVFSRPQRRGHLFPDVPVSPPRQVEPEGKR
YCVRHQEVKYMNWKFNFRLSPSQGPRIYNVRYLDKLIVYELALQDIAVFYSGAEPQHKYANFFDSSFLIGANLEGMVPGV
DCPTGATFIDTHVVVGNSIKPLKLRNAFCVFEQNTGDPLRRHMSTKYGYGVFFEGAPSNVLILRTIVTISNYDYTVDFIF
HQNGVLQTKVVPTGFILPSMFTKNNWSKYGFRLNNKLVGNLHHHAFNFKVDIDINGQHNRYETLDIVPDETNHPSSSDPF
DVWYQSRIRRSVKKTEAESLLKFNFDQPKYHIFYNNNIKSPEGNDMAYRLVNKGMSKSILPEGIGNEGTGAWMRYQLAVT
RRKETEPTSSSVYSAFGSYNPVVNFKTFYSDNENILDKVYRRKRNKTFIHRL

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