Gene
| Gene Model ID | pfu_aug2.0_3533.1_12481 |
|---|---|
| Locus | scaffold3533.1 : 27736 ... 29329 : + |
| To GenomeBrowser | scaffold3533.1:27736..29329 |
| Genes list of scaffold | scaffold3533.1 |
| Synonym | pfu_aug1.0_7246.1_67662 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3533.1_12481.t1 | 7 | 1 | Nitro_FeMo-Co | 48 | 67 | 3.8e-07 | 30.0 | 0.061 | 300.0 | 1.5 |
| pfu_aug2.0_3533.1_12481.t1 | 7 | 2 | Nitro_FeMo-Co | 57 | 78 | 3.8e-07 | 30.0 | 0.035 | 170.0 | 2.3 |
| pfu_aug2.0_3533.1_12481.t1 | 7 | 3 | Nitro_FeMo-Co | 90 | 110 | 3.8e-07 | 30.0 | 0.0056 | 28.0 | 4.8 |
| pfu_aug2.0_3533.1_12481.t1 | 7 | 4 | Nitro_FeMo-Co | 112 | 133 | 3.8e-07 | 30.0 | 0.0047 | 23.0 | 5.1 |
| pfu_aug2.0_3533.1_12481.t1 | 7 | 5 | Nitro_FeMo-Co | 147 | 166 | 3.8e-07 | 30.0 | 0.016 | 79.0 | 3.4 |
| pfu_aug2.0_3533.1_12481.t1 | 7 | 6 | Nitro_FeMo-Co | 156 | 177 | 3.8e-07 | 30.0 | 0.038 | 190.0 | 2.2 |
| pfu_aug2.0_3533.1_12481.t1 | 7 | 7 | Nitro_FeMo-Co | 255 | 275 | 3.8e-07 | 30.0 | 0.0056 | 28.0 | 4.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3533.1_12481.t1 | gi|676453066|ref|XP_009053235.1| | hypothetical protein LOTGIDRAFT_116101 [Lottia gigantea] | 2.0e-32 |
| pfu_aug2.0_3533.1_12481.t1 | gi|755545949|ref|XP_011242903.1| | PREDICTED: zinc finger protein 431-like, partial [Mus musculus] | 1.0e-20 |
| pfu_aug2.0_3533.1_12481.t1 | gi|568983990|ref|XP_006517560.1| | PREDICTED: zinc finger protein 431-like isoform X2 [Mus musculus] | 3.0e-19 |
| pfu_aug2.0_3533.1_12481.t1 | gi|612002618|ref|XP_007486165.1| | PREDICTED: zinc finger protein 836-like [Monodelphis domestica] | 6.0e-19 |
| pfu_aug2.0_3533.1_12481.t1 | gi|390333738|ref|XP_003723773.1| | PREDICTED: uncharacterized protein YMR317W [Strongylocentrotus purpuratus] | 2.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_3533.1_12481.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3533.1_12481.t1 atgaagagggagggagtaaaaagtaacagcttcataactagaattatcaagagggatggagtaaaagggtgtaaccatat aggagttaaaccttgtccagagcgtaaccatataggagttaaaccttctccagatcgtaaccatgtaggagttaaaccat atcaagagtgtaaccatataggagttaaaccatatcaagagcgtaaccatataggagttaaaccatatccagatcgtaac catataggagttaaaccatatcaagagtgtaaccatataggagttaaaccatatcaagagtgtaaccatataggagttaa accatatcaagagtgtaaccatataggagttaaaccatatcaagagtgtaaccatataggagttaaaccatatcaagagt gtaaccatataggagttaaaccttctccagatcgtaaccatataggagttaaaccatatcaagagtgtaaccatatagga gttaaaccatatcaagagcgtaaccatataggagttaaaccatatccagatcgtaaccatataggagttaaatcttatcc agatcgtaaccatataggagttaaatcttatccagattgtaaccatataggagttaaatcttattcagatcgtaaccata taggagttaaatcttatccagaacgtaaccatataggagttaaatcttatccagaacgtaaccatataggagttaaacct tatccagatcgtaaccatataggagttaaaccatatcaagagtgtaaccatataggagttaaaccatatcaagagtgtaa ccatataggagttacaccatatcaagagtgtaaccatataggagttaaatcttatccagatcgtaaccatataggagtta aatcctctcttattacattttgtacaatttactaa |
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Protein
| Protein ID | pfu_aug2.0_3533.1_12481.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3533.1_12481.t1 MKREGVKSNSFITRIIKRDGVKGCNHIGVKPCPERNHIGVKPSPDRNHVGVKPYQECNHIGVKPYQERNHIGVKPYPDRN HIGVKPYQECNHIGVKPYQECNHIGVKPYQECNHIGVKPYQECNHIGVKPYQECNHIGVKPSPDRNHIGVKPYQECNHIG VKPYQERNHIGVKPYPDRNHIGVKSYPDRNHIGVKSYPDCNHIGVKSYSDRNHIGVKSYPERNHIGVKSYPERNHIGVKP YPDRNHIGVKPYQECNHIGVKPYQECNHIGVTPYQECNHIGVKSYPDRNHIGVKSSLITFCTIY |
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