Gene
| Gene Model ID | pfu_aug2.0_3542.1_09173 |
|---|---|
| Locus | scaffold3542.1 : 39239 ... 40435 : - |
| To GenomeBrowser | scaffold3542.1:39239..40435 |
| Genes list of scaffold | scaffold3542.1 |
| Synonym | pfu_aug1.0_79837.1_56580 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3542.1_09173.t1 | 1 | 1 | 7TM_GPCR_Srw | 39 | 332 | 1.4e-09 | 37.5 | 7.6e-13 | 2.3e-09 | 36.8 |
| pfu_aug2.0_3542.1_09173.t1 | 2 | 1 | 7TM_GPCR_Srx | 40 | 165 | 1.9e-06 | 27.1 | 6.5e-10 | 1.9e-06 | 27.1 |
| pfu_aug2.0_3542.1_09173.t1 | 1 | 1 | 7tm_1 | 47 | 317 | 9.4e-14 | 51.1 | 4.2e-17 | 1.2e-13 | 50.7 |
| pfu_aug2.0_3542.1_09173.t1 | 2 | 2 | 7TM_GPCR_Srx | 216 | 289 | 1.9e-06 | 27.1 | 0.0059 | 18.0 | 4.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3542.1_09173.t1 | gi|676449204|ref|XP_009051980.1| | hypothetical protein LOTGIDRAFT_159415 [Lottia gigantea] | 2.0e-17 |
| pfu_aug2.0_3542.1_09173.t1 | gi|524914291|ref|XP_005111962.1| | PREDICTED: probable G-protein coupled receptor C02B8.5-like [Aplysia californica] | 4.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_3542.1_09173.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3542.1_09173.t1 atggatcagacaatggataattctactgaagaaacccataacgtcacagctggtccggcaggcctttaccctatggtcgt tgaacgaatcatccttcattgctttatctctccgctgatcatattagtcgggattgtcggtaatgttatgacggtttgtg tgcttcaccaaataaaacagcaatcttcgtcatcccagttcctgctaagtttggccatatctgacacaacgacgcttctc atcagaactatatatatggtatttgtatgggctcaactattctttccaacagaggtcaatcaatggttgttaaattccta ctctttcttcaaactgtctcattcaacagagagagtgagcaagatgaccttggtctccattgttattgaaagggttattg ccgtgtaccttccattgcagatgaagactatattttccacgatgaaagttaggattctgatcatacttatctaccttgta atcatggcaatgtccttaccaaacagtgtagatgtcctgatatttgacctaaattaccaatcaccaatcaagattcaccc aatgacacaaatggatgcttccgaatatttaaaactaagcttatataaatccccaggcagagcaatctacaatactttca acagggtcatgttcgatttcctacctatcccaatagtcataatatgtaatttagctatcatcattggcttgaagagacaa aagaacattggatcatcagctgcccaaaatcaaaggaaacaaaaggataggcaactaacacgtctgcttctgactgttag cttatgctttcttatcctgtgtggactatttgatttttacgctttctgcgtactcacaaacacaattactatttccaata gcactctaatcatgagtgaagtattcaaaacggctagtttattgaattgctctataaactttattatctatgccttcatg aacaagaaatacagagagaagtacgtagagaatttcctcttctgcacaagatgcttgagacaagatggaaatcacatagg agatgaaacacctgattcaacaccttggagcacaaaatcgtccaaagaaacatcggaattgtaa |
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Protein
| Protein ID | pfu_aug2.0_3542.1_09173.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3542.1_09173.t1 MDQTMDNSTEETHNVTAGPAGLYPMVVERIILHCFISPLIILVGIVGNVMTVCVLHQIKQQSSSSQFLLSLAISDTTTLL IRTIYMVFVWAQLFFPTEVNQWLLNSYSFFKLSHSTERVSKMTLVSIVIERVIAVYLPLQMKTIFSTMKVRILIILIYLV IMAMSLPNSVDVLIFDLNYQSPIKIHPMTQMDASEYLKLSLYKSPGRAIYNTFNRVMFDFLPIPIVIICNLAIIIGLKRQ KNIGSSAAQNQRKQKDRQLTRLLLTVSLCFLILCGLFDFYAFCVLTNTITISNSTLIMSEVFKTASLLNCSINFIIYAFM NKKYREKYVENFLFCTRCLRQDGNHIGDETPDSTPWSTKSSKETSEL |
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