Gene
| Gene Model ID | pfu_aug2.0_355.1_17326 |
|---|---|
| Locus | scaffold355.1 : 162097 ... 190875 : - |
| To GenomeBrowser | scaffold355.1:162097..190875 |
| Genes list of scaffold | scaffold355.1 |
| Synonym | pfu_aug1.0_20698.1_33128 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_355.1_17326.t1 | 1 | 1 | NUDIX_4 | 256 | 359 | 6.6e-12 | 44.8 | 3.4e-15 | 1.7e-11 | 43.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_355.1_17326.t1 | gi|260818109|ref|XP_002603927.1| | hypothetical protein BRAFLDRAFT_248509 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_355.1_17326.t1 | gi|118403607|ref|NP_001072831.1| | A/G-specific adenine DNA glycosylase [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_355.1_17326.t1 | gi|701434208|ref|XP_010004996.1| | PREDICTED: A/G-specific adenine DNA glycosylase [Chaetura pelagica] | 0.0 |
| pfu_aug2.0_355.1_17326.t1 | gi|677784628|ref|XP_009083240.1| | PREDICTED: A/G-specific adenine DNA glycosylase, partial [Acanthisitta chloris] | 0.0 |
| pfu_aug2.0_355.1_17326.t1 | gi|632963801|ref|XP_007898086.1| | PREDICTED: A/G-specific adenine DNA glycosylase isoform X1 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_355.1_17326.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_355.1_17326.t1 atgcaacaatctaccctgcatttctttgaaggaaaatttcagatatcagttggtaaagtcaagtatgaatgtcaaaaagt gaaagtagctaataaatttcgtaacttcaattttatgaaaaatttaccttggtacgagctgtcacaaacactaaaagtta tggtaaagaggaaaacttgtcagaaaggaggccagagagaagaaaaccctgtaccatgtgttcatgattttgtagagaag gagattcagactttcagaactagtttgctgaagtggtatagagagaacaaaagggacttgccatggagaaaacaggaagt gaatgagatgtggtcagggcttggttattactccagaggtcggcggttgttcgaaggtgctgttaaggttgtaaatagtt tccaaggtagaatgcctacgacagcagagagcttactgaaggaactaccaggtgtaggcaggtacactgctggtgctata gcttctatagcatataatcagccaacaggcctggtggatggtaatgtgattcgagttctaagcagaatgcgagtgatagg agcggatagtaccagtgctgcagtacaggataaaatatggtctgatgccaacaagttggtggacccaacagaaatccaga aaacaaagtcgtcatcaaagcttgttgtaaacaaaccaaaggagataccagatatagagtgtttggtagatggttgtaat ctatgtattcctgaacaagaaaactacgatgaaaggacttttggatgtttgctggcaggcctgtgggaatttccatcctt agttcgtgaccctaacttcggggatatcaaaacacctatttttttgttaagagatgcttgtggtgctacatgtaatcttt tgagtacagtttgggaaggaacagttggagaggtgacgcacatattttcacatattcatcagacatactttgtacaaaaa atgaccattgatgaaggagtggtggaattaccatccaatcccaaaactgctttaaagtgggtgacaaaagaggagttctt ggatgcaggcacctcgactgccatgaaaaaggtcttcaaggcttatgaaaacagttgtagtccaaaacaggacaagaaaa agaaagaagatccaaagcaaccatccataagttctttcttcaaaaagaaatcataa |
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Protein
| Protein ID | pfu_aug2.0_355.1_17326.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_355.1_17326.t1 MQQSTLHFFEGKFQISVGKVKYECQKVKVANKFRNFNFMKNLPWYELSQTLKVMVKRKTCQKGGQREENPVPCVHDFVEK EIQTFRTSLLKWYRENKRDLPWRKQEVNEMWSGLGYYSRGRRLFEGAVKVVNSFQGRMPTTAESLLKELPGVGRYTAGAI ASIAYNQPTGLVDGNVIRVLSRMRVIGADSTSAAVQDKIWSDANKLVDPTEIQKTKSSSKLVVNKPKEIPDIECLVDGCN LCIPEQENYDERTFGCLLAGLWEFPSLVRDPNFGDIKTPIFLLRDACGATCNLLSTVWEGTVGEVTHIFSHIHQTYFVQK MTIDEGVVELPSNPKTALKWVTKEEFLDAGTSTAMKKVFKAYENSCSPKQDKKKKEDPKQPSISSFFKKKS |
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