Gene
| Gene Model ID | pfu_aug2.0_3557.1_25787 |
|---|---|
| Locus | scaffold3557.1 : 38162 ... 45625 : - |
| To GenomeBrowser | scaffold3557.1:38162..45625 |
| Genes list of scaffold | scaffold3557.1 |
| Synonym | pfu_aug1.0_1795.1_22759 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sterile alpha and tir motif-containing protein 1 isoform x4 | GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3557.1_25787.t1 | 1 | 1 | TIR_2 | 175 | 289 | 6.1e-19 | 68.0 | 1.2e-22 | 9.1e-19 | 67.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3557.1_25787.t1 | gi|642935890|ref|XP_008198215.1| | PREDICTED: sterile alpha and TIR motif-containing protein 1 isoform X5 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_3557.1_25787.t1 | gi|642935888|ref|XP_008198214.1| | PREDICTED: sterile alpha and TIR motif-containing protein 1 isoform X4 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_3557.1_25787.t1 | gi|642935882|ref|XP_008198211.1| | PREDICTED: sterile alpha and TIR motif-containing protein 1 isoform X1 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_3557.1_25787.t1 | gi|642935884|ref|XP_008198212.1| | PREDICTED: sterile alpha and TIR motif-containing protein 1 isoform X2 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3557.1_25787.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3557.1_25787.t1 atgtcaaaaagttcattttcgcgtggatcctccagaactgattctccacttgacatgttagatataaagacttcacattc agataagtttgatcccagtaaaatcatagaaaggtcgcagtccgatatctccatgctgccgaaatccacttcacaggagc agaaaaaaagtgtctcgtatcaagtctcatctagctccagcagcgaacgtgtcagtcgattacagaaagaaaagagcggt aaaatatctgaaagtgccaaagtttattttgatttatctagcgatgagtcttttgaatttggacaagctaagtcttcagt caattataaggacagaaaactctgcaaggaaaactcagttgactccctcagccaggaggaggaaatctccatcagtcggc attcgtcaagcgcaaatctgtactgtcagatatctttaccaaagtacggcagcatagggagtttacaacggcagaaaagt attgatcccacaggcttctccacatatcctaaagccgttgacgtgttcatcagctatcgtagatcgaacggatctcaact agctagccttcttaaagtgcacttacaactaagaggattttcagtatttctggacatagatcgtttgagagcaggaaaat ttgatgagaatttgctcatgaacattaaaatggctcgtcatttcctgttagtactgactcctaacgctctagatcggtgt atgggtgatatagaacagcaagattggattcataaggaggtagctacagctttggagagtgagtgtaatataatacctgt cctggactcgtttgaatggccgtccccagatgaactaccggaagacatgcaacaagtcgtctacttcaacggcgtacggt aa |
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Protein
| Protein ID | pfu_aug2.0_3557.1_25787.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3557.1_25787.t1 MSKSSFSRGSSRTDSPLDMLDIKTSHSDKFDPSKIIERSQSDISMLPKSTSQEQKKSVSYQVSSSSSSERVSRLQKEKSG KISESAKVYFDLSSDESFEFGQAKSSVNYKDRKLCKENSVDSLSQEEEISISRHSSSANLYCQISLPKYGSIGSLQRQKS IDPTGFSTYPKAVDVFISYRRSNGSQLASLLKVHLQLRGFSVFLDIDRLRAGKFDENLLMNIKMARHFLLVLTPNALDRC MGDIEQQDWIHKEVATALESECNIIPVLDSFEWPSPDELPEDMQQVVYFNGVR |
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