Gene
| Gene Model ID | pfu_aug2.0_357.1_23918 |
|---|---|
| Locus | scaffold357.1 : 68184 ... 88035 : - |
| To GenomeBrowser | scaffold357.1:68184..88035 |
| Genes list of scaffold | scaffold357.1 |
| Synonym | pfu_aug1.0_16550.1_54313 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| solute carrier family member 9 | GO:0006810 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_357.1_23918.t1 | 3 | 1 | SNF | 9 | 107 | 0.0 | 455.2 | 0.0 | 1.99965e-42 | 145.4 |
| pfu_aug2.0_357.1_23918.t1 | 3 | 2 | SNF | 108 | 123 | 0.0 | 455.2 | 0.049 | 730.0 | -1.7 |
| pfu_aug2.0_357.1_23918.t1 | 3 | 3 | SNF | 146 | 393 | 0.0 | 455.2 | 0.0 | 0.0 | 318.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_357.1_23918.t1 | gi|676441290|ref|XP_009049448.1| | hypothetical protein LOTGIDRAFT_141413, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_357.1_23918.t1 | gi|742214254|ref|XP_010861096.1| | PREDICTED: sodium- and chloride-dependent glycine transporter 1 [Bison bison bison] | 0.0 |
| pfu_aug2.0_357.1_23918.t1 | gi|542184189|ref|XP_005469436.1| | PREDICTED: sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_357.1_23918.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_357.1_23918.t1 atgggttcagggggagagaatgagagggcggcgtggggtaaccagttggagtttatcctcacctgtgtcggttttgctgt gggactaggaaatgtttggagatttccttatctggccttcaaaaacggaggaggagccttcttgattccatactttacat gtctggtagtgataggaataccattattttaccttgagctttcatttggtcagtttgccagtcttgggcctataaaaata tggaagttcaaccctgcaatgaaaggactagggtacgccatggtgatcgtatccgcccttatagctttatattacgacgt ggactgcgacaagacgtggaacacgtgtgaatgtcaggacggtaatcagaacttctcactggtagacccgtggcaaggaa ggaggaactcatgtctgacgttcaactacacgcacggtgcaagaggagtaggggccaaggttgtatattttactgctacg tttccatacattttactgaccgcccttctgatccggggtcttacattggaaggtcactatgacggaatcatgtattatct aacacctgatttcagcaagctaactgatgcacaggtatggtcggatgctgcagtccagatattttattccctcagcgcat gctcaggagggcttatagccatggccagctacaacaaattcaacaataactgtctcagagatgcatttttggtgcctata ataaactgtttgacaagtttttacgccggatttgtgattttctccgttcttggttttatggcgcatgcaaaaggcgtacc agtggacgaagttgcaaaaggaggacccggattgacattcgtagtttacccagaaggccttgcccagatgccagctgccc ccgtgtggtcgtttttatttttctttatgatggccactttaggattcagttctcagttttccatcgttgagactgtgatc acaggattgatagatgaattctcatacttttctaaaacaacgtttaggcgtattggtttccggttttgcatctgcgcaat aggtttcctgctcggtctaccaatgacaacacggggtggagtatatatgttaaacgtcgtggatcatttcgttggaggat tccccttactctttgtcggacttttcgagcttgtatccattaactacatctatggtaatctatgtgtacagctgaatttt caccaagacgattggggaccggccttggaagaaaacagaacaggacgctatgttaaaagtgctaatacccacgaaatgaa cgattttaattctccagcaggcaatgcttacccgacaaaagatgccatcaacaacggatacactgttgacatccataata acggagtcatgacggaaacgtgcgatccggcaccgatgaacgggatgaaaaaccctgcttatattgaagacgatactgac aagacaaagttctga |
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Protein
| Protein ID | pfu_aug2.0_357.1_23918.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_357.1_23918.t1 MGSGGENERAAWGNQLEFILTCVGFAVGLGNVWRFPYLAFKNGGGAFLIPYFTCLVVIGIPLFYLELSFGQFASLGPIKI WKFNPAMKGLGYAMVIVSALIALYYDVDCDKTWNTCECQDGNQNFSLVDPWQGRRNSCLTFNYTHGARGVGAKVVYFTAT FPYILLTALLIRGLTLEGHYDGIMYYLTPDFSKLTDAQVWSDAAVQIFYSLSACSGGLIAMASYNKFNNNCLRDAFLVPI INCLTSFYAGFVIFSVLGFMAHAKGVPVDEVAKGGPGLTFVVYPEGLAQMPAAPVWSFLFFFMMATLGFSSQFSIVETVI TGLIDEFSYFSKTTFRRIGFRFCICAIGFLLGLPMTTRGGVYMLNVVDHFVGGFPLLFVGLFELVSINYIYGNLCVQLNF HQDDWGPALEENRTGRYVKSANTHEMNDFNSPAGNAYPTKDAINNGYTVDIHNNGVMTETCDPAPMNGMKNPAYIEDDTD KTKF |
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