Gene
| Gene Model ID | pfu_aug2.0_357.1_23923 |
|---|---|
| Locus | scaffold357.1 : 220991 ... 223101 : + |
| To GenomeBrowser | scaffold357.1:220991..223101 |
| Genes list of scaffold | scaffold357.1 |
| Synonym | pfu_aug1.0_7479.1_17117 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dnaj homolog subfamily c member 27-like | GO:0005525 GO:0007264 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_357.1_23923.t1 | 1 | 1 | Arf | 22 | 135 | 7.2e-09 | 35.1 | 7.1e-12 | 1.0e-08 | 34.5 |
| pfu_aug2.0_357.1_23923.t1 | 1 | 1 | Ras | 23 | 136 | 9.4e-29 | 99.8 | 8.1e-32 | 1.2e-28 | 99.5 |
| pfu_aug2.0_357.1_23923.t1 | 1 | 1 | Miro | 24 | 135 | 2.6e-15 | 56.9 | 2.7e-18 | 3.9e-15 | 56.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_357.1_23923.t1 | gi|524885106|ref|XP_005099164.1| | PREDICTED: dnaJ homolog subfamily C member 27-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_357.1_23923.t1 | gi|260819612|ref|XP_002605130.1| | hypothetical protein BRAFLDRAFT_265784 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_357.1_23923.t1 | gi|390340009|ref|XP_003725147.1| | PREDICTED: dnaJ homolog subfamily C member 27 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_357.1_23923.t1 | gi|291244325|ref|XP_002742053.1| | PREDICTED: dnaJ homolog subfamily C member 27-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_357.1_23923.t1 | gi|196002223|ref|XP_002110979.1| | hypothetical protein TRIADDRAFT_54457 [Trichoplax adhaerens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_357.1_23923.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_357.1_23923.t1 atggaccgtaaacctggccatttgactaaaaatcctcaagacgctgtcaattctcttgtatggataaaggtaatcggaat aggaaattcaaatgttgggaaaacatgtttgattaaacatttctgcgagagcaagttcagtggaggatatcaaccaacag tcggggtggattatggtttcaaaatacaaaatgtggacggaatagatcttcgtgttcacctatgggatctttccgggagt tccgagtacattgacgtcaggaacgagctgtacattaacactgacgccattttccttgtgtttgacgtcaccaaccaatc aacgttcgagacgcttgacacatggatgaaagaggtgtcaaaatactcatctggtaccccagatatcatcttagtcgcta acaaggtatgtaatggcataacaacagtcatcgtcgtcgtcatcatcatcgttgtcgtcgtcgtcgtcgtcaaagcagct gtcgccaccgctggtcaccatcttcttcttcttcttcttcttcttctatgcaatcatcatcgggagtttaatgtctgtag attatcatag |
|
Protein
| Protein ID | pfu_aug2.0_357.1_23923.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_357.1_23923.t1 MDRKPGHLTKNPQDAVNSLVWIKVIGIGNSNVGKTCLIKHFCESKFSGGYQPTVGVDYGFKIQNVDGIDLRVHLWDLSGS SEYIDVRNELYINTDAIFLVFDVTNQSTFETLDTWMKEVSKYSSGTPDIILVANKVCNGITTVIVVVIIIVVVVVVVKAA VATAGHHLLLLLLLLLCNHHREFNVCRLS |
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