Gene
| Gene Model ID | pfu_aug2.0_357.1_23925 |
|---|---|
| Locus | scaffold357.1 : 265148 ... 312760 : - |
| To GenomeBrowser | scaffold357.1:265148..312760 |
| Genes list of scaffold | scaffold357.1 |
| Synonym | pfu_aug1.0_8406.1_53175 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transient receptor potential channel | GO:0016020 GO:0044765 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_357.1_23925.t1 | 2 | 1 | Ank_2 | 53 | 133 | 2.5e-14 | 53.3 | 1.5e-12 | 2.7e-09 | 37.2 |
| pfu_aug2.0_357.1_23925.t1 | 4 | 1 | Ank_4 | 54 | 104 | 1.1e-09 | 38.5 | 7.3e-08 | 0.00014 | 22.3 |
| pfu_aug2.0_357.1_23925.t1 | 3 | 1 | Ank_5 | 72 | 108 | 4.5e-07 | 29.8 | 1.6e-05 | 0.03 | 14.5 |
| pfu_aug2.0_357.1_23925.t1 | 3 | 1 | Ank | 84 | 109 | 1.7e-09 | 36.9 | 2.5e-05 | 0.046 | 13.5 |
| pfu_aug2.0_357.1_23925.t1 | 4 | 1 | Ank_3 | 84 | 108 | 1.4e-08 | 34.1 | 2.8e-06 | 0.0053 | 16.8 |
| pfu_aug2.0_357.1_23925.t1 | 3 | 2 | Ank_5 | 112 | 136 | 4.5e-07 | 29.8 | 0.23 | 440.0 | 1.3 |
| pfu_aug2.0_357.1_23925.t1 | 4 | 2 | Ank_4 | 113 | 132 | 1.1e-09 | 38.5 | 0.079 | 150.0 | 3.0 |
| pfu_aug2.0_357.1_23925.t1 | 3 | 2 | Ank | 113 | 132 | 1.7e-09 | 36.9 | 0.22 | 400.0 | 1.1 |
| pfu_aug2.0_357.1_23925.t1 | 4 | 2 | Ank_3 | 113 | 132 | 1.4e-08 | 34.1 | 0.28 | 520.0 | 1.4 |
| pfu_aug2.0_357.1_23925.t1 | 2 | 2 | Ank_2 | 277 | 305 | 2.5e-14 | 53.3 | 3.6e-05 | 0.067 | 13.5 |
| pfu_aug2.0_357.1_23925.t1 | 3 | 3 | Ank_5 | 277 | 303 | 4.5e-07 | 29.8 | 0.0006 | 1.1 | 9.5 |
| pfu_aug2.0_357.1_23925.t1 | 3 | 3 | Ank | 280 | 302 | 1.7e-09 | 36.9 | 9.7e-07 | 0.0018 | 17.9 |
| pfu_aug2.0_357.1_23925.t1 | 4 | 3 | Ank_4 | 281 | 299 | 1.1e-09 | 38.5 | 0.0022 | 4.0 | 8.0 |
| pfu_aug2.0_357.1_23925.t1 | 4 | 3 | Ank_3 | 281 | 302 | 1.4e-08 | 34.1 | 0.00016 | 0.29 | 11.4 |
| pfu_aug2.0_357.1_23925.t1 | 1 | 1 | TRP_2 | 313 | 375 | 8.8e-30 | 102.4 | 1.4e-32 | 2.6e-29 | 100.9 |
| pfu_aug2.0_357.1_23925.t1 | 2 | 1 | PKD_channel | 522 | 797 | 3.8e-12 | 45.3 | 2.6e-13 | 4.7e-10 | 38.4 |
| pfu_aug2.0_357.1_23925.t1 | 2 | 1 | Ion_trans | 562 | 791 | 1.3e-35 | 122.4 | 5.6e-37 | 1.0e-33 | 116.2 |
| pfu_aug2.0_357.1_23925.t1 | 2 | 2 | PKD_channel | 778 | 857 | 3.8e-12 | 45.3 | 0.00011 | 0.21 | 9.9 |
| pfu_aug2.0_357.1_23925.t1 | 2 | 2 | Ion_trans | 816 | 851 | 1.3e-35 | 122.4 | 0.00035 | 0.65 | 9.2 |
| pfu_aug2.0_357.1_23925.t1 | 4 | 4 | Ank_4 | 961 | 977 | 1.1e-09 | 38.5 | 7.0 | 13000.0 | -3.2 |
| pfu_aug2.0_357.1_23925.t1 | 4 | 4 | Ank_3 | 964 | 976 | 1.4e-08 | 34.1 | 6.7 | 12000.0 | -2.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_357.1_23925.t1 | gi|675873800|ref|XP_009022460.1| | hypothetical protein HELRODRAFT_66730 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_357.1_23925.t1 | gi|157108422|ref|XP_001650221.1| | AAEL005014-PA [Aedes aegypti] | 0.0 |
| pfu_aug2.0_357.1_23925.t1 | gi|241161902|ref|XP_002409021.1| | transient receptor potential channel 4, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_357.1_23925.t1 | gi|665786011|ref|XP_008550202.1| | PREDICTED: transient receptor potential-gamma protein isoform X2 [Microplitis demolitor] | 0.0 |
| pfu_aug2.0_357.1_23925.t1 | gi|749752339|ref|XP_011138512.1| | PREDICTED: transient receptor potential-gamma protein [Harpegnathos saltator] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_357.1_23925.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_357.1_23925.t1 atggacaaggtatattaccaatacagggagaagctgatgaaccagggtcggcttatggaggaccccggtattgacgtgga ggggggaggggacagcctggggatgggggtcataagaaaggaggtggaccttacgaacgacgaaaaacagtatctgttgg ccgtggaaaggggggatgtaccttctacacggcagtacctcagcatgggggttcagaccggactcaatattaattgtgtg gaccccttggggcggactgccttactggtggctatagagaacgagaacatagaaatgatagaagtgctgttaagttataa tgtggaattaggtgacgcccttctccatgctattacagaggagaacgtagaggctgtggagttattactgaaccatgaag tggcaacgaaaggagaagcgattaggaagggatttcttacaagcatcccgaaaacaacaggcatttcacactcaaattgt ggaaacggacagcatacatgtacatatcaacacatggtcgagtggaccatgggatcaacctgtgggaagcaaagttataa agccacaatggtgtacaaagccacaatggtgtacaaagccacaatggtgtacaaagccacaatgatgtacaaagccacaa tggtgtacaaagccacaatggtgtacaaagccacaatggtgtacaaagccacaatggtgtacaaagccacaatggtgtac aaagccacaatggtgtacaaagaaggtgctcagccttggcctttttataatagacttgcagagggaattctaaaggcttt acatcaatctgttccctccagttccttcacaccagacattacgcctattattctagctgctcacagagacaattatgaaa tcatcaagcttttgttggatcgaggctacaggataccgaaacctcatgacgtcaggtgtaattgtaaaaactgtaaaatc gtcagttctgacgacagtttacgtcactcacggtcacgcatcaacgcctaccgagctctagccagtccgtcattaattgc actgtccagtaaagacccgattcttacctcatttgaactcagctgggaactcaaaagactcagtaaattggaaaacgaat ttaaaattgactacgaaaagttagcgaaaaagtgtcaagaatttgcagtagacttgttggatcaaatacgggggtccaag gagctagaaattattctgaatcatgactccagtaatcctaacgactatgctgaacaggagcctcaaacaggggataaaat gaggctctcaaggctcaaactggccatcaagttcaaacagaaaaagtttgttgctcacccgaactgccagcagctgctag cctcgttatggtatgaggggttgcccggattcagacgacataacatagtagctagactgtcaatcaccgttattataggc attgtctttccacttctttccattttctatttgatcgctccaaagagtcgacccggaaaacttcttcgaaaaccatttat caagtttatatgtcatagtgcagcttacattacattcctagttttattgatattagtatcacagagggtaactataccca tacccggtgtggcctcacagacctcagatattgagaaaataaagatggagaggcggggggcacctgccactatggtggaa tggatgattttagcctatgtagctggtctaatatggactgagatcaagcagttatgggacgaaggagcccacgagtatgt acgtgatatgtggaatatattggactttgttactaattctctgtacatagcaactttaactctcagggtcatagcatact tacaagtacaaaaagaaatagcagagaacaatcctaatgcgttagctgagaggaaggattggaatccatacgaccctaac cttatagcggaggcactgtttgctgccgccaatatattcagttcattaaagctcatttacatatttactgtgaaccccca tttggggccccttcagatatctctaggacgtatgatattagatatcatgaagtttgctgtgttatatgtattagtgcttt tttcattcgcgtgtggattaaaccatctatattggtactatgcaacgttacgagaggaggagtgtaaggtacagaataag ctaccgtcctgtgaccggaagtacaaaagcttcgctaatctatttgaaatattacaaagtctatattggtctatatatgg cctggtagacttagaccatgccgagttgacggacccggaccatgatttcacggagtttgtgggaaagctcatgttcggca gttatagctggatagcatttgtagtattgttaaatctactgatagccactatgagtaactcatatcaacatatttctagt ctgtattggatgatatacggccttgtagacctgagtcattctgaactcagacacgaagaacacactataacagaatttgt agggaaattaatgcttggtacctacagttacattgctctggtggtcttactcaatctacttatagcaatgatgagtaatt cttaccataatatctcaagtcaggccgacgaggaatggaagtttgcacggtctaggttatggatgagttactttgaggac agcggtactctaccagcaccgtttaatattatacccagtcctaagactttctattatttaatcacgtggtttaggagtaa agtatgtgtgtgttcgaaagatcagaaaaggaatagatggcagagtatacggaatgttatgagagatctgatcaagaggt acataatgcagaaacaacgtggtccgctacggggagagggcgttaccgaagatgacgtcagcgagattaaacaagacatt tcgtcattccgatacgagcttctagaaattttaaggaacaatggcatgaaaaccccaaacccgaatcaacctaaaccaac caaccgcagatcaacgcgaaggaaaatcacaattgaaagactaaagcggtcttttactatgggaacgataaaggagtcat cagaccagaagaaacctcctccgccggattactccgctatagagggtgagtcaacttcaccaataaaaagtcccgtcacc aagactcacagtgcagggactatagacgaaccctcgagtccaagaccaacattttcaatagactcaaatttcctgagccc gtccgacatccctgagatcccagaggacaatacgccgatagaaagagtgccgaggaggggcaggaggttccaaaggatcg gcaaacagaaagtagacgaaggactcggcgagtccatagatttgaactcagaacagagcaataacagtcctaagtttccg gagaaatttatgtctgattcggaatattccggatgtaagattaagagcaatacttcggcggcgatagtcgaagcgtcact cagtagtctgaccgatgccgatattttcacacagttccaaggactcgcagaacctaaatcgccacttaaaagggtcactt tcctctga |
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Protein
| Protein ID | pfu_aug2.0_357.1_23925.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_357.1_23925.t1 MDKVYYQYREKLMNQGRLMEDPGIDVEGGGDSLGMGVIRKEVDLTNDEKQYLLAVERGDVPSTRQYLSMGVQTGLNINCV DPLGRTALLVAIENENIEMIEVLLSYNVELGDALLHAITEENVEAVELLLNHEVATKGEAIRKGFLTSIPKTTGISHSNC GNGQHTCTYQHMVEWTMGSTCGKQSYKATMVYKATMVYKATMVYKATMMYKATMVYKATMVYKATMVYKATMVYKATMVY KATMVYKEGAQPWPFYNRLAEGILKALHQSVPSSSFTPDITPIILAAHRDNYEIIKLLLDRGYRIPKPHDVRCNCKNCKI VSSDDSLRHSRSRINAYRALASPSLIALSSKDPILTSFELSWELKRLSKLENEFKIDYEKLAKKCQEFAVDLLDQIRGSK ELEIILNHDSSNPNDYAEQEPQTGDKMRLSRLKLAIKFKQKKFVAHPNCQQLLASLWYEGLPGFRRHNIVARLSITVIIG IVFPLLSIFYLIAPKSRPGKLLRKPFIKFICHSAAYITFLVLLILVSQRVTIPIPGVASQTSDIEKIKMERRGAPATMVE WMILAYVAGLIWTEIKQLWDEGAHEYVRDMWNILDFVTNSLYIATLTLRVIAYLQVQKEIAENNPNALAERKDWNPYDPN LIAEALFAAANIFSSLKLIYIFTVNPHLGPLQISLGRMILDIMKFAVLYVLVLFSFACGLNHLYWYYATLREEECKVQNK LPSCDRKYKSFANLFEILQSLYWSIYGLVDLDHAELTDPDHDFTEFVGKLMFGSYSWIAFVVLLNLLIATMSNSYQHISS LYWMIYGLVDLSHSELRHEEHTITEFVGKLMLGTYSYIALVVLLNLLIAMMSNSYHNISSQADEEWKFARSRLWMSYFED SGTLPAPFNIIPSPKTFYYLITWFRSKVCVCSKDQKRNRWQSIRNVMRDLIKRYIMQKQRGPLRGEGVTEDDVSEIKQDI SSFRYELLEILRNNGMKTPNPNQPKPTNRRSTRRKITIERLKRSFTMGTIKESSDQKKPPPPDYSAIEGESTSPIKSPVT KTHSAGTIDEPSSPRPTFSIDSNFLSPSDIPEIPEDNTPIERVPRRGRRFQRIGKQKVDEGLGESIDLNSEQSNNSPKFP EKFMSDSEYSGCKIKSNTSAAIVEASLSSLTDADIFTQFQGLAEPKSPLKRVTFL |
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