Gene
| Gene Model ID | pfu_aug2.0_358.1_27285 |
|---|---|
| Locus | scaffold358.1 : 85431 ... 87725 : - |
| To GenomeBrowser | scaffold358.1:85431..87725 |
| Genes list of scaffold | scaffold358.1 |
| Synonym | pfu_aug1.0_4993.1_16565 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_358.1_27285.t1 | 1 | 1 | Peptidase_A17 | 5 | 90 | 1.4e-18 | 67.2 | 5.0e-22 | 3.7e-18 | 65.8 |
| pfu_aug2.0_358.1_27285.t1 | 1 | 1 | rve | 393 | 525 | 1.3e-11 | 44.7 | 3.8e-15 | 2.8e-11 | 43.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_358.1_27285.t1 | gi|551514919|ref|XP_005808968.1| | PREDICTED: uncharacterized protein LOC102236676, partial [Xiphophorus maculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_358.1_27285.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_358.1_27285.t1 atggtaacaaatctaagcaaagccaaaagaacagagttactgatattctcagatgcctctgaacaggcaattgccgctgt ctgttatttgagagcaatttacaacgatggtcatactgagattggatttgtgctcggaaaggcaaaggttgcgccggtat caggtcacacgataccaagattagagttgtgcgctgcggttttggcggtagagatatatcagttagttttggatcatctc aaaatggaatttgactctgtccgtttcttcactgattcacgagtggttttaggatacatttgtaacgataaaagacgttt ctttgtttatgtatcgaaccgcgtctctcgcatccggagttgtactacacctgatcaatggaattacgttccttcaatca ccaacccagctgaccaaggtaccagaggtgtgaacgctatagacattcagaacagctcttggttaaaaggtcccgcgtgt gattttggatcagataaggatacttcttacccgttggccaatcctttattggatgaggaagtccgtatcgattgtttgaa aactagcttggaacccactccagcagtatgtactccttttggaagcgatctgtttcagcgttactcaaaatggagaaaac ttgtgaacgtaatctccgttgttcgatttttcatcgctaagtgcagaaatgaggaaactgactcatctttgaaacattcc gtaaaatcattcatagatacggagcgctggatcttgaagaaagtacagcatgaggaatattttgaggaaatgaattgcct ccactcttctcagccgattcatagaagcagcaaaattatatctctggatccgttcctcgatcaaaacggtatcttgcgcg ttggtggaaggttgggaaaaatggatactgacacttgcttcataaaccctatcatcattccaggaaatcacaatgttgca cgacttctcattctcatgtgtcatgaagaagttgcccatcaaggccgtcactttacagaaggcaggataagatcccacgg atattggatcactgggtgcaagagattagttgcgtccattattcacaaatgcgtctcgtgtaagaaattgcgtggaaaac ttgaagtacaaaaaatggccgatctacctatagaccgcatcacacccggacaaccaccttttacctatattggagtcgat atgttcggtccctgggaaatcatgactcgccgtacacgaggaggagctgcaaatagtaagcgttggacagccatgtttac atgtctagtgacacgcgcagtgcacatagaggtaaccgaagaaatgtcggcatcttcatttattaacgcactccgtagat tggttgccattcgaggcagggtacgggaaattcgatcagatcgaggtagcaatttcataggagccgcagatcttcttgga gccgactctgtaaacgtggaatctggttgcgttagtgaattcctgcgaaatagtggaatcgtatggcgcttcaaccctcc tcactcttctcacatgggaggagtgtgggagaggatgataggagtgacaagacgcatactcgactcaatgcttcttcgta ataccgtaggacgacttacccatgaagtcttggtaacatttttcgctgaagcaagtgcaatcataaatgctcgtccgcta attcctgtctcttccgatccgagtatgccttatatcctgacaccttcgctacttcttacccagaaatctgattctgttga cgacactattccgctagatgaagatcctaaaaatcttcttcggagtcaatggaaaagattgcagcatctcgcaaacattt tctggaaactttggaggactgaatacctacctcttttacagcctaggaaaatgtggcgtcaaaaacagagaaatattttc gtgcacgatgtagttctgattaaagacaaagacgcaaaacgaaacgagtggcccatgggtatcgttgtgaaaacatttcc tagcgatgatgatctcgtgacaaaggtgcaagtgcgtgttattcgcgatgaaaagccatatacacgcggccaattacaga ccttgtgttgttag |
|
Protein
| Protein ID | pfu_aug2.0_358.1_27285.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_358.1_27285.t1 MVTNLSKAKRTELLIFSDASEQAIAAVCYLRAIYNDGHTEIGFVLGKAKVAPVSGHTIPRLELCAAVLAVEIYQLVLDHL KMEFDSVRFFTDSRVVLGYICNDKRRFFVYVSNRVSRIRSCTTPDQWNYVPSITNPADQGTRGVNAIDIQNSSWLKGPAC DFGSDKDTSYPLANPLLDEEVRIDCLKTSLEPTPAVCTPFGSDLFQRYSKWRKLVNVISVVRFFIAKCRNEETDSSLKHS VKSFIDTERWILKKVQHEEYFEEMNCLHSSQPIHRSSKIISLDPFLDQNGILRVGGRLGKMDTDTCFINPIIIPGNHNVA RLLILMCHEEVAHQGRHFTEGRIRSHGYWITGCKRLVASIIHKCVSCKKLRGKLEVQKMADLPIDRITPGQPPFTYIGVD MFGPWEIMTRRTRGGAANSKRWTAMFTCLVTRAVHIEVTEEMSASSFINALRRLVAIRGRVREIRSDRGSNFIGAADLLG ADSVNVESGCVSEFLRNSGIVWRFNPPHSSHMGGVWERMIGVTRRILDSMLLRNTVGRLTHEVLVTFFAEASAIINARPL IPVSSDPSMPYILTPSLLLTQKSDSVDDTIPLDEDPKNLLRSQWKRLQHLANIFWKLWRTEYLPLLQPRKMWRQKQRNIF VHDVVLIKDKDAKRNEWPMGIVVKTFPSDDDLVTKVQVRVIRDEKPYTRGQLQTLCC |
|