Gene
| Gene Model ID | pfu_aug2.0_358.1_27293 |
|---|---|
| Locus | scaffold358.1 : 317110 ... 328199 : + |
| To GenomeBrowser | scaffold358.1:317110..328199 |
| Genes list of scaffold | scaffold358.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_358.1_27293.t1 | 2 | 1 | Neur_chan_LBD | 59 | 97 | 1.1e-31 | 109.6 | 0.00033 | 5.0 | 6.2 |
| pfu_aug2.0_358.1_27293.t1 | 2 | 2 | Neur_chan_LBD | 101 | 297 | 1.1e-31 | 109.6 | 4.1e-34 | 6.1e-30 | 103.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_358.1_27293.t1 | gi|156400820|ref|XP_001638990.1| | predicted protein [Nematostella vectensis] | 4.0e-21 |
| pfu_aug2.0_358.1_27293.t1 | gi|118780521|ref|XP_310203.3| | AGAP009493-PA [Anopheles gambiae str. PEST] | 4.0e-21 |
| pfu_aug2.0_358.1_27293.t1 | gi|641718761|ref|XP_008148957.1| | PREDICTED: neuronal acetylcholine receptor subunit alpha-2 [Eptesicus fuscus] | 4.0e-20 |
| pfu_aug2.0_358.1_27293.t1 | gi|291237546|ref|XP_002738695.1| | PREDICTED: neuronal acetylcholine receptor subunit alpha-7-like [Saccoglossus kowalevskii] | 5.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_358.1_27293.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_358.1_27293.t1 atggaaaatagatggcttttgctaagtgtctttacagcgttaacaatatttcaatgtagtgctgcaccggacgctgaggg ttggtttttctcgtcagatgtacaaacagcacagtcatctttggttgagtttgacactacaactaaagctgatagttctg atcttctagaatcggacctttttgatgaacttctgttcactgagtataagaaggatatcagacctgctacgtatgactat cccgtggtacaagtgacccaatggttgtccattattgatagttctgatcttctagaatcggacctttttgatgaacttct gttcactgagtataagaaggatatcagacctgctacgtatgactatcccgtggtacaagtgacccaatggttgtccatta ttggtataaatttgcaaaaaacaaattggctagaggtttttggttgggaaaccatacaatggacagatccaagattgata tggaatcctacagagttcaataacctaaaggttataaaccttgatcccgaccaaatatggataccggatattattctgtg gaatggatcaacacagaactccggtcggattcacagcaacatgaaagctcgggttacaagtcatggtcacgtgcattatg cccctatggttcgtcatgtgatcagatgtgttccaaagggtgaagtgttcgattgtaaaatgacatacggatcatgggct tatgatagtactcagttagccttgaatattacacgggactatgtagacatctctacctacaattctaactcggactttac catcgtgaatacatctgcagaactgcacacctcaacgtcagaatgttgcccaggagcgttctacgatatcacgtacacta tcaccctcaaatggaaggattcagacagttttgatggtctttcgcctcaggatgaaactggtggttatgtttcaagtaca aaatacggaaccgacaaaacatcaactggaatgaatagtactgataccaacaatggcacccaaagtttcgactccccaac aggaactaacagtaccacttcaaacaacaataccgaaagctaa |
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Protein
| Protein ID | pfu_aug2.0_358.1_27293.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_358.1_27293.t1 MENRWLLLSVFTALTIFQCSAAPDAEGWFFSSDVQTAQSSLVEFDTTTKADSSDLLESDLFDELLFTEYKKDIRPATYDY PVVQVTQWLSIIDSSDLLESDLFDELLFTEYKKDIRPATYDYPVVQVTQWLSIIGINLQKTNWLEVFGWETIQWTDPRLI WNPTEFNNLKVINLDPDQIWIPDIILWNGSTQNSGRIHSNMKARVTSHGHVHYAPMVRHVIRCVPKGEVFDCKMTYGSWA YDSTQLALNITRDYVDISTYNSNSDFTIVNTSAELHTSTSECCPGAFYDITYTITLKWKDSDSFDGLSPQDETGGYVSST KYGTDKTSTGMNSTDTNNGTQSFDSPTGTNSTTSNNNTES |
|