Gene
| Gene Model ID | pfu_aug2.0_3582.1_09180 |
|---|---|
| Locus | scaffold3582.1 : 12317 ... 15865 : - |
| To GenomeBrowser | scaffold3582.1:12317..15865 |
| Genes list of scaffold | scaffold3582.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3582.1_09180.t1 | 1 | 1 | SH3_2 | 4 | 62 | 1.6e-09 | 37.1 | 5.3e-13 | 2.0e-09 | 36.8 |
| pfu_aug2.0_3582.1_09180.t1 | 1 | 1 | SH3_1 | 22 | 58 | 1.2e-07 | 30.9 | 5.1e-11 | 1.9e-07 | 30.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3582.1_09180.t1 | gi|676442975|ref|XP_009049970.1| | hypothetical protein LOTGIDRAFT_231098 [Lottia gigantea] | 6.0e-13 |
| pfu_aug2.0_3582.1_09180.t1 | gi|390336869|ref|XP_003724443.1| | 2.0e-09 | |
| pfu_aug2.0_3582.1_09180.t1 | gi|156382303|ref|XP_001632493.1| | predicted protein [Nematostella vectensis] | 2.0e-08 |
| pfu_aug2.0_3582.1_09180.t1 | gi|585717543|ref|XP_006825717.1| | PREDICTED: uncharacterized protein LOC100368964 [Saccoglossus kowalevskii] | 3.0e-08 |
| pfu_aug2.0_3582.1_09180.t1 | gi|558127539|ref|XP_006115576.1| | PREDICTED: proto-oncogene tyrosine-protein kinase Yrk-like [Pelodiscus sinensis] | 8.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_3582.1_09180.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3582.1_09180.t1 atggaggtttatgtagcggtttcagactttatttctccaaactgcgagggatcgcaaaatattctcagcttcagaagggg agacaaatttgagatttttgactgtcacaagtcgagttcagaatggtggggtgcccgtgctctcagcaacaacagcgtgg gatatgtaccatcaaagtacatgaagatgtcgggttgtaatcaccgtagaaagaaggaggagtacaaagagagaatggtg actgatgtttataggatgctattgtctcacctataa |
|
Protein
| Protein ID | pfu_aug2.0_3582.1_09180.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3582.1_09180.t1 MEVYVAVSDFISPNCEGSQNILSFRRGDKFEIFDCHKSSSEWWGARALSNNSVGYVPSKYMKMSGCNHRRKKEEYKERMV TDVYRMLLSHL |
|