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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_3596.1_22409
Locus scaffold3596.1 : 27986 ... 29215 : -
To GenomeBrowser scaffold3596.1:27986..29215
Genes list of scaffold scaffold3596.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_3596.1_22409.t1 gi|585669546|ref|XP_006817698.1| PREDICTED: E3 ubiquitin-protein ligase MSL2-like [Saccoglossus kowalevskii] 2.0e-21
pfu_aug2.0_3596.1_22409.t1 gi|751220798|ref|XP_011163548.1| PREDICTED: E3 ubiquitin-protein ligase MSL2 isoform X3 [Solenopsis invicta] 3.0e-20
pfu_aug2.0_3596.1_22409.t1 gi|524868203|ref|XP_005090906.1| PREDICTED: uncharacterized protein LOC101847469 [Aplysia californica] 6.0e-15
pfu_aug2.0_3596.1_22409.t1 gi|632934582|ref|XP_007885556.1| PREDICTED: E3 ubiquitin-protein ligase MSL2 [Callorhinchus milii] 2.0e-14
pfu_aug2.0_3596.1_22409.t1 gi|254028201|ref|NP_001156785.1| male-specific lethal 2 homolog [Danio rerio] 4.0e-14

Transcript
Transcript IDpfu_aug2.0_3596.1_22409.t1
Definition-
>pfu_aug2.0_3596.1_22409.t1
atgaaactaaagccacagtgcagctggtgcaaaaattacaatgacttcgaagagaacacacaactgagagtgttagtgtt
gtgcttcaagaaactatgtgaatatatcagccacagtccaataggtgaagatctacgatcattgactaccaatggagaaa
caaacaatctagtaacaatcatacaagaggctttagatttttatgatgagtttcatctacaaacactttctataccattt
ctatttggagccccagaaccaagtttattgaccaataagtcaaatgaaagtgtaccgtcaacatctaaagaatcagaaac
caaaagtaggaagcaagaagtcacagaagtttgccagtattcaaattctgagttgtcagacacttctgagaaagcagacg
aaaaagttgaaaaaatacaatctgcagcagaaataacacatatagtgcatcatgatttatcaccagtatcttcagatgaa
atcatagatgtttgtaaaacaccaagtcccattgaaaaggataaacacagtaaaaagaaaaagtctgtgttatcattcga
caaaacaaagaacacatcaatattggagcaaaaagtactcttattcaattgtgtgaaagaaaaaggtgctcaaaagttag
ctacaccagtggtagatttagcagttaagaaacctaaagttgtactgacaaacacaaaacagacaaattcaaaaggttgc
aaatgtggcagaggaggaacaaatagtcgcttgacttgcctagggcaaagatgtccgtgttacataaagaagttgccgtg
tatcggatgtagatgtacaggctgtcgtaatccacggaaagcagccaatcataatggcagctcagcatcattaaatcaca
gtgtaatagatgatagatacttgcaaaatgaaagagggattgtaccatctgtttga

Protein
Protein IDpfu_aug2.0_3596.1_22409.t1
Definition-
>pfu_aug2.0_3596.1_22409.t1
MKLKPQCSWCKNYNDFEENTQLRVLVLCFKKLCEYISHSPIGEDLRSLTTNGETNNLVTIIQEALDFYDEFHLQTLSIPF
LFGAPEPSLLTNKSNESVPSTSKESETKSRKQEVTEVCQYSNSELSDTSEKADEKVEKIQSAAEITHIVHHDLSPVSSDE
IIDVCKTPSPIEKDKHSKKKKSVLSFDKTKNTSILEQKVLLFNCVKEKGAQKLATPVVDLAVKKPKVVLTNTKQTNSKGC
KCGRGGTNSRLTCLGQRCPCYIKKLPCIGCRCTGCRNPRKAANHNGSSASLNHSVIDDRYLQNERGIVPSV

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