Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_360.1_00647
Locus scaffold360.1 : 44156 ... 65227 : +
To GenomeBrowser scaffold360.1:44156..65227
Genes list of scaffold scaffold360.1
Synonym pfu_aug1.0_7781.1_24284

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_360.1_00647.t1 gi|676487301|ref|XP_009064248.1| hypothetical protein LOTGIDRAFT_235960 [Lottia gigantea] 3.0e-29
pfu_aug2.0_360.1_00647.t1 gi|524901326|ref|XP_005107072.1| PREDICTED: retinitis pigmentosa 1-like 1 protein-like [Aplysia californica] 5.0e-15
pfu_aug2.0_360.1_00647.t1 gi|242000456|ref|XP_002434871.1| hypothetical protein IscW_ISCW006498 [Ixodes scapularis] 8.0e-06

Transcript
Transcript IDpfu_aug2.0_360.1_00647.t1
Definition-
>pfu_aug2.0_360.1_00647.t1
atgcaaagcaacagacaaacgatccctccagaaacccatccttgcgtcagaaacagatttacaaaaattggccaaactca
cagcaatgtcaatggtaaagaagacagacttcaagaagaagaaaataaagtgataaacacagacaacggtaaagttgtct
ctgatgttcgacaaaaatctgaaaaagactcatcatctaaagtgcctcatacacaaacgaaagtagacatacctgcctta
ggaatacacgagactgtggactctgacaaatcatttaatctcccacgaccggaagaggtgttggattacgacgacgcctt
cagatttacaccttcaatagtagccgaataccttgtacagaccggagaattccagcagtttgacgaagcactggcagacc
ttgttaattcttccttgatgacacctcaacaggcagatctatgcaaagacaacgtaaggcaagaatacaacagaattgta
caggagagcaatgcaatgcttgcaaacgaggccctcggaaacatgtattatccagtatcatacgacttcccgccaatcga
gaacgaggctgacataaatttgaatcctgagacgtcagacggtgagatttacagacttctaggattttcaaacatcattc
ctcatcttggaattgaggagttacagagcaaagaagtcatgcgtgaagccataagtcgtgctacctccctaatagaacta
ataaaaacgctgatggacgaatggttaacccgagcaattgtcacagccgatccagaggcagaaaaacttttgggagatat
cttgaaggaggttgctaaggacaatgacccggatgatctatcccagatgagagatattctatatgagttctttgcaaatg
aagtgctgaacagtcttcagaagagacccggatcaaacatggcgggcatgggtgacattgcgcaaatcccgatcccatcc
gcggaagatctgaaagatagcaaaacagacgacaaagcactgactcaacagacatctgaacaacatgaagtaccttccgg
tcatgtgacagacgacaaatcagacaaagtggaagaaaatctgaagcatttgaaaatgtag

Protein
Protein IDpfu_aug2.0_360.1_00647.t1
Definition-
>pfu_aug2.0_360.1_00647.t1
MQSNRQTIPPETHPCVRNRFTKIGQTHSNVNGKEDRLQEEENKVINTDNGKVVSDVRQKSEKDSSSKVPHTQTKVDIPAL
GIHETVDSDKSFNLPRPEEVLDYDDAFRFTPSIVAEYLVQTGEFQQFDEALADLVNSSLMTPQQADLCKDNVRQEYNRIV
QESNAMLANEALGNMYYPVSYDFPPIENEADINLNPETSDGEIYRLLGFSNIIPHLGIEELQSKEVMREAISRATSLIEL
IKTLMDEWLTRAIVTADPEAEKLLGDILKEVAKDNDPDDLSQMRDILYEFFANEVLNSLQKRPGSNMAGMGDIAQIPIPS
AEDLKDSKTDDKALTQQTSEQHEVPSGHVTDDKSDKVEENLKHLKM

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495