Gene
| Gene Model ID | pfu_aug2.0_360.1_00648 |
|---|---|
| Locus | scaffold360.1 : 78335 ... 105005 : - |
| To GenomeBrowser | scaffold360.1:78335..105005 |
| Genes list of scaffold | scaffold360.1 |
| Synonym | pfu_aug1.0_25560.1_55080 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_360.1_00648.t1 | 4 | 1 | ABC_membrane | 151 | 190 | 0.0 | 183.8 | 1.4 | 1100.0 | -1.3 |
| pfu_aug2.0_360.1_00648.t1 | 4 | 2 | ABC_membrane | 323 | 513 | 0.0 | 183.8 | 8.9e-26 | 6.9e-23 | 81.4 |
| pfu_aug2.0_360.1_00648.t1 | 4 | 3 | ABC_membrane | 534 | 616 | 0.0 | 183.8 | 7.0e-05 | 0.055 | 12.8 |
| pfu_aug2.0_360.1_00648.t1 | 2 | 1 | ABC_tran | 678 | 812 | 0.0 | 167.3 | 2.1e-23 | 1.6e-20 | 73.7 |
| pfu_aug2.0_360.1_00648.t1 | 3 | 1 | SMC_N | 688 | 710 | 8.2e-08 | 31.7 | 0.00056 | 0.43 | 9.7 |
| pfu_aug2.0_360.1_00648.t1 | 4 | 4 | ABC_membrane | 1015 | 1288 | 0.0 | 183.8 | 2.7e-33 | 2.1e-30 | 106.0 |
| pfu_aug2.0_360.1_00648.t1 | 2 | 2 | ABC_tran | 1356 | 1504 | 0.0 | 167.3 | 6.8e-29 | 5.3e-26 | 91.5 |
| pfu_aug2.0_360.1_00648.t1 | 3 | 2 | SMC_N | 1370 | 1388 | 8.2e-08 | 31.7 | 0.12 | 93.0 | 2.1 |
| pfu_aug2.0_360.1_00648.t1 | 3 | 3 | SMC_N | 1398 | 1544 | 8.2e-08 | 31.7 | 5.6e-06 | 0.0044 | 16.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_360.1_00648.t1 | gi|166158220|ref|NP_001107301.1| | canalicular multispecific organic anion transporter 2 [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_360.1_00648.t1 | gi|529442698|ref|XP_005241075.1| | PREDICTED: multidrug resistance-associated protein 1 [Falco peregrinus] | 0.0 |
| pfu_aug2.0_360.1_00648.t1 | gi|527250344|ref|XP_005143485.1| | PREDICTED: multidrug resistance-associated protein 1 [Melopsittacus undulatus] | 0.0 |
| pfu_aug2.0_360.1_00648.t1 | gi|701312838|ref|XP_010017530.1| | PREDICTED: multidrug resistance-associated protein 1, partial [Nestor notabilis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_360.1_00648.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_360.1_00648.t1 atgagtatttcgaatcctacaaattcatcatcttttgaccagttttgtggtcattccgaattgtggaatgatgacgtgtt atcgggagatgctccagcgttcacgccctgtttccaagacacggtcctggtgtatgtaccctttggatggctcctggtct ccttgcctttctattttccatatctctacaagaaacctccgggattcagtcttccgttgacagcttttagtgttaccaaa tcagtcctttctgcaatattgctgattttgactttattagaagtctgggcccatgacacatacgggtatctttgtcagtc cgatgacgtcccgatctcatattatgtaggagtagtcgttcgtagtatattttacatcatagttactttattcattcagt acttacgggttaaacgtgtatataattccggtgtattgtacacgttttggattttacttttattttctgcgattattcca ctgcaatggaaaatatcgttccagccgtcctgtaccagcagcattatctactacatttattttgccgtcatctcactaca atgtattctccattcatttgccgacaaagtccagaaaccaggttatcaacttcttggacagcaagatactggacttatag tccgtcattttatgcccctggaatcaaggattcgagggcatatagtttttgacctatccgtctaacaagcaatgtccaga aggacagtcatctgtactcaacaggctgtcattctggtggatgagtggtgtcgtcatcacagcttntcagtaaagtatga aaagcatatgcacaccaacggaagaccaaacggggatatgatgaatgaaaaagaacctttattgtccaaatcggaatcgg cggaattctaccagaaagagcgtacaaagcctatcaaaccatctctatacagagttcttattcgtacttattggaaacaa tggttcttctcgtccttcctcaagattatagacgacatttttgctcttggtcaaccattcattttgaaatacatcatcga tattattgagaccaaaaaaccagacgaatctcctgattggagaggatacacattggctatcctatttttcttggctggga tggggacaacgattttctacagtcagtctgcctacgtcatgatgagattgggtttacaaatgaaaactgctgtcattggt atcatttacaaaaaggcgctgaccatgagcaatgcctccaagaagaattactccgtaggtgacatagtcaatttgatgtc cgtggactgtcagaggttacaagacgcttttcaatttcaatatgaaatcgtctcctttttcgtcatgatagctttaggac tgtacctgatttggatagagatgggcttgtccaccgtgggaagtctggttgtaatcgtggtggtggcaattattcaaata tggtttggcaaacttcaagaagtgtaccaaatcatcattctaaagttgaaaagtagccgaatcagacttttgaaggaggt tttaaacggcattaaggtggagatcgagtccatgcagcaagttcatctattcttaaatgatgttgttgaatttgaagacg tcctgaaaatgtatacatgggagccgtcgtttacatccaaagtattagacattcgtgatggtgagatgaaattcctgaag aaagtagcaactgtgacgtcatggtcattactcttgtctatccacagtccatttcttatgcagttttcaatcttgatgct gtatgtattgctgtcatccaatagttacctcagcgcttccaaggtctttacggcattatccaccgtaaatattcttaggt tctctttgaccatgacaccattcgtcgtaactggtgttacacagttgtatgtatccgttgggcggatccaagaattcctg tggaaagaggacttggacaccgataatgtttctaaaaatcttaattccgattatgctgtttccatagaaaacggcacttt tacttgggacagagaagatccaaacatcacactgaaaaacattgatgtaaaggtcccggatggtaagctggtagctgttg ttggacaggtcggatcaggtaaatcctcgttagtgtcagctatgttaggtgaactggaaaaagtgggtggaaaggtcaat gtcaagggctcaattgcgtatgtaccacaagaagcatggatccagaatcttacagtgaaggataatatactttttgggga aacatatatcgaaagaaagtatcagaaagtcataaaagcgtgtgcactgctccctgatttggccatactgtcagcaggag atcaaactgaaattggagaaaaggggattaatgtcagcgggggtcaaaaacagcgcattagcttagctagagctgtctat aacaactgtgacgtatacttcctggatgatccgttgtcagctgttgatagtcacgtaggcaaggacctgttccgaaatgt cattggcaacactgggcttctgaaacataagacccgaattcttgtgacccatggagttcattggttaccgatgtttttac agacttatttattacatggcaaccaagatgaggacgaggaagatcacgagatttcaaaaatgaaagaccaaatatgggag caagtagaaaatgcgatgtcggactacgatggtatatctgctgaagagggactttctcgaaggaaaagtatgaggaaagc ttcacaagggcttattctgaaagacgaaatccaaaaaagtgcagttggtcctgactcaatgaccagacgacggtccaaga taaccatgcaacgccagatatcggaaacacaatcagcaattacagagtcattgactcgagggaatatgcccaaacttcac agagcgatgtcacaagggaggagcctaccatttgacgatgaaaaggaggaccatgatgaaaaagcaagcgggagtcttac tacagaagaaacaacaaaagttggcacggtaaaactagctgtctttattgcatacataaaagccatgggtacattcggag ccttcctttctgtattttcaatggcagttttccaaggattaaatgtatacggaaatttctatttaacgttttggactgaa gacgatttactaaaaaatcaaagcctaagtaacacagttgaatatgcggacagaaatctatattacttaggtgtatatac tcttttaggagtcatacaaggtatctttttatttctattcggaatcatcggtttgcgacgtcttgtgagagcagccggaa atcttcattcaacaatgttgcattgtgtcatgcgttcaccaatgtcgttctttgatacgacccctctgggaaggatcatg aacagattttccagtgatgttgatattttagatgacagattacctcgtacctacaggttgttcaatgctatgttcttttc tatgatcggaattctggtagtgatcagtatcaatacgccagcatttctcatcgcaattgtaccagttgggatcttctatg ttttggtcttgcgtttctacttaccaacagctcgtcaacttaaaaggatcgagtccgtaactagatccccaatttacaat cacttcagtgagacaatttccggtgctagcagcatccgggcatatagagcagccgaccgttttgttgatgtttcacattc cagagtggacagaaattcagcattttattttgccgccatatcaggatcctggtggattggcgttcgtttagaatttctcg ggaacattctggttctagcggcagctctcttctcaatcatacagacagacattagtggtgctgacattggattgtcctta acatactctatgcaaatcatcatagcccttaatttggtagtacaagctgtcagtgagatggaaatgaacgttgtgtcggc ggaacgtgtagaggaatacactgttcttcaacctgaggctgaatggatccttcctccacatcgcccatctccctcttggc ctgagaccgggaaagttaattttgtagaatatacaacaagatatcgcccaggattagacttggttcttagaggaatcaat tgtaatatcaatgatggagaaaaggttggaatcgttggaagaactggagcagggaagtcttcgctttccttatccttgtt caggctcatagaggctgcaggtggtggaatcgacatcgatggtcaacgcatctctgacatagggcttcatgacctaaggt ccaaaatcactattctacctcaggatcctgttttattttctggtccattgagacagagccttgatcccttggagttgttc actgatgccgacatatggctagccatagagagagctcatctgaagccttatataatgacccaacctgctaaactcaacat ggaatgtggagaaggaggctctaacttcagtgttggacagagacagttggtgtgtttggcccggactctgctccataaaa ccaaggtgttgatactggatgaagccacggcagctgttgatatagagacagacgaactgatccaggagacaatacggacg gaattctcagagtgcacagtgctaactatagctcacagacttaacacagttatggattatgatagaatcatggtcctaga caaaggactgattgtagaattcgattctccaaagaaattacttactgataaggagggtgtgttttacaaaatggcgaaag atgccaacctggtcggctag |
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Protein
| Protein ID | pfu_aug2.0_360.1_00648.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_360.1_00648.t1 MSISNPTNSSSFDQFCGHSELWNDDVLSGDAPAFTPCFQDTVLVYVPFGWLLVSLPFYFPYLYKKPPGFSLPLTAFSVTK SVLSAILLILTLLEVWAHDTYGYLCQSDDVPISYYVGVVVRSIFYIIVTLFIQYLRVKRVYNSGVLYTFWILLLFSAIIP LQWKISFQPSCTSSIIYYIYFAVISLQCILHSFADKVQKPGYQLLGQQDTGLIVRHFMPLESRIRGHIVFDLSVXQAMSR RTVICTQQAVILVDEWCRHHSXSVKYEKHMHTNGRPNGDMMNEKEPLLSKSESAEFYQKERTKPIKPSLYRVLIRTYWKQ WFFSSFLKIIDDIFALGQPFILKYIIDIIETKKPDESPDWRGYTLAILFFLAGMGTTIFYSQSAYVMMRLGLQMKTAVIG IIYKKALTMSNASKKNYSVGDIVNLMSVDCQRLQDAFQFQYEIVSFFVMIALGLYLIWIEMGLSTVGSLVVIVVVAIIQI WFGKLQEVYQIIILKLKSSRIRLLKEVLNGIKVEIESMQQVHLFLNDVVEFEDVLKMYTWEPSFTSKVLDIRDGEMKFLK KVATVTSWSLLLSIHSPFLMQFSILMLYVLLSSNSYLSASKVFTALSTVNILRFSLTMTPFVVTGVTQLYVSVGRIQEFL WKEDLDTDNVSKNLNSDYAVSIENGTFTWDREDPNITLKNIDVKVPDGKLVAVVGQVGSGKSSLVSAMLGELEKVGGKVN VKGSIAYVPQEAWIQNLTVKDNILFGETYIERKYQKVIKACALLPDLAILSAGDQTEIGEKGINVSGGQKQRISLARAVY NNCDVYFLDDPLSAVDSHVGKDLFRNVIGNTGLLKHKTRILVTHGVHWLPMFLQTYLLHGNQDEDEEDHEISKMKDQIWE QVENAMSDYDGISAEEGLSRRKSMRKASQGLILKDEIQKSAVGPDSMTRRRSKITMQRQISETQSAITESLTRGNMPKLH RAMSQGRSLPFDDEKEDHDEKASGSLTTEETTKVGTVKLAVFIAYIKAMGTFGAFLSVFSMAVFQGLNVYGNFYLTFWTE DDLLKNQSLSNTVEYADRNLYYLGVYTLLGVIQGIFLFLFGIIGLRRLVRAAGNLHSTMLHCVMRSPMSFFDTTPLGRIM NRFSSDVDILDDRLPRTYRLFNAMFFSMIGILVVISINTPAFLIAIVPVGIFYVLVLRFYLPTARQLKRIESVTRSPIYN HFSETISGASSIRAYRAADRFVDVSHSRVDRNSAFYFAAISGSWWIGVRLEFLGNILVLAAALFSIIQTDISGADIGLSL TYSMQIIIALNLVVQAVSEMEMNVVSAERVEEYTVLQPEAEWILPPHRPSPSWPETGKVNFVEYTTRYRPGLDLVLRGIN CNINDGEKVGIVGRTGAGKSSLSLSLFRLIEAAGGGIDIDGQRISDIGLHDLRSKITILPQDPVLFSGPLRQSLDPLELF TDADIWLAIERAHLKPYIMTQPAKLNMECGEGGSNFSVGQRQLVCLARTLLHKTKVLILDEATAAVDIETDELIQETIRT EFSECTVLTIAHRLNTVMDYDRIMVLDKGLIVEFDSPKKLLTDKEGVFYKMAKDANLVG |
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