Gene
| Gene Model ID | pfu_aug2.0_360.1_00649 |
|---|---|
| Locus | scaffold360.1 : 118516 ... 162630 : + |
| To GenomeBrowser | scaffold360.1:118516..162630 |
| Genes list of scaffold | scaffold360.1 |
| Synonym | pfu_aug1.0_9330.1_02744 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_360.1_00649.t1 | 2 | 1 | ABC_membrane | 318 | 508 | 0.0 | 164.8 | 3.2e-23 | 1.3e-20 | 73.9 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 1 | DUF258 | 606 | 650 | 3.1e-08 | 32.9 | 2.2e-05 | 0.0095 | 15.1 |
| pfu_aug2.0_360.1_00649.t1 | 4 | 1 | ABC_tran | 607 | 694 | 0.0 | 163.7 | 1.0e-12 | 4.4e-10 | 39.9 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 1 | AAA_29 | 612 | 637 | 5.7e-09 | 35.3 | 4.9e-05 | 0.021 | 14.3 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 1 | AAA_25 | 614 | 657 | 5.9e-08 | 32.3 | 0.0025 | 1.1 | 8.6 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 1 | AAA_16 | 616 | 652 | 6.2e-11 | 42.6 | 0.00012 | 0.052 | 13.5 |
| pfu_aug2.0_360.1_00649.t1 | 5 | 1 | SMC_N | 617 | 639 | 5.1e-07 | 29.1 | 0.00042 | 0.18 | 11.0 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 1 | Zeta_toxin | 618 | 642 | 5.1e-06 | 25.7 | 0.00022 | 0.093 | 11.8 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 1 | MMR_HSR1 | 620 | 641 | 7.5e-10 | 38.7 | 0.00012 | 0.05 | 13.5 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 1 | Miro | 620 | 651 | 1.4e-07 | 32.0 | 0.00016 | 0.069 | 13.6 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 2 | AAA_25 | 923 | 968 | 5.9e-08 | 32.3 | 0.002 | 0.86 | 8.9 |
| pfu_aug2.0_360.1_00649.t1 | 4 | 2 | ABC_tran | 938 | 1003 | 0.0 | 163.7 | 9.3e-12 | 4.0e-09 | 36.8 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 2 | DUF258 | 945 | 968 | 3.1e-08 | 32.9 | 0.061 | 26.0 | 3.9 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 2 | AAA_29 | 947 | 964 | 5.7e-09 | 35.3 | 0.025 | 11.0 | 5.6 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 2 | MMR_HSR1 | 950 | 969 | 7.5e-10 | 38.7 | 0.01 | 4.4 | 7.3 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 2 | Miro | 950 | 965 | 1.4e-07 | 32.0 | 0.062 | 26.0 | 5.3 |
| pfu_aug2.0_360.1_00649.t1 | 5 | 2 | SMC_N | 952 | 971 | 5.1e-07 | 29.1 | 0.23 | 98.0 | 2.0 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 2 | AAA_16 | 953 | 1040 | 6.2e-11 | 42.6 | 0.0007 | 0.3 | 11.0 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 2 | Zeta_toxin | 953 | 981 | 5.1e-06 | 25.7 | 0.15 | 62.0 | 2.6 |
| pfu_aug2.0_360.1_00649.t1 | 4 | 3 | ABC_tran | 1003 | 1025 | 0.0 | 163.7 | 5.6e-05 | 0.024 | 14.9 |
| pfu_aug2.0_360.1_00649.t1 | 5 | 3 | SMC_N | 1010 | 1065 | 5.1e-07 | 29.1 | 0.00077 | 0.33 | 10.1 |
| pfu_aug2.0_360.1_00649.t1 | 2 | 2 | ABC_membrane | 1439 | 1709 | 0.0 | 164.8 | 7.1e-30 | 3.0e-27 | 95.7 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 3 | DUF258 | 1771 | 1816 | 3.1e-08 | 32.9 | 2.6e-05 | 0.011 | 14.9 |
| pfu_aug2.0_360.1_00649.t1 | 4 | 4 | ABC_tran | 1772 | 1906 | 0.0 | 163.7 | 3.5e-24 | 1.5e-21 | 77.1 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 3 | AAA_29 | 1777 | 1802 | 5.7e-09 | 35.3 | 4.0e-05 | 0.017 | 14.6 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 3 | AAA_25 | 1779 | 1822 | 5.9e-08 | 32.3 | 0.00077 | 0.32 | 10.3 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 3 | AAA_16 | 1780 | 1809 | 6.2e-11 | 42.6 | 8.9e-05 | 0.038 | 13.9 |
| pfu_aug2.0_360.1_00649.t1 | 5 | 4 | SMC_N | 1782 | 1804 | 5.1e-07 | 29.1 | 0.00039 | 0.17 | 11.1 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 3 | Zeta_toxin | 1783 | 1809 | 5.1e-06 | 25.7 | 0.00018 | 0.076 | 12.1 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 3 | MMR_HSR1 | 1785 | 1807 | 7.5e-10 | 38.7 | 0.00011 | 0.048 | 13.6 |
| pfu_aug2.0_360.1_00649.t1 | 3 | 3 | Miro | 1785 | 1808 | 1.4e-07 | 32.0 | 0.00025 | 0.1 | 13.0 |
| pfu_aug2.0_360.1_00649.t1 | 5 | 5 | SMC_N | 1860 | 1912 | 5.1e-07 | 29.1 | 2.7 | 1200.0 | -1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_360.1_00649.t1 | gi|602654449|ref|XP_007433061.1| | PREDICTED: canalicular multispecific organic anion transporter 2 isoform X2 [Python bivittatus] | 0.0 |
| pfu_aug2.0_360.1_00649.t1 | gi|564245028|ref|XP_006261642.1| | PREDICTED: multidrug resistance-associated protein 1 [Alligator mississippiensis] | 0.0 |
| pfu_aug2.0_360.1_00649.t1 | gi|729760229|ref|XP_010577008.1| | PREDICTED: canalicular multispecific organic anion transporter 2 isoform X2 [Haliaeetus leucocephalus] | 0.0 |
| pfu_aug2.0_360.1_00649.t1 | gi|641797995|ref|XP_008162188.1| | PREDICTED: canalicular multispecific organic anion transporter 2 isoform X4 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_360.1_00649.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_360.1_00649.t1 atgcagtgcaatgatgacgtgttatcaggagatgctccagcttttacgccctgttttcaagacacggtcctggtttatgt accatttggatggctactggtgaccttgcctttctatataagatatctgttaaagaaacctcccggatccagtctaccag taacgacaatcagcgtaattaaatcggttctatgtcttgtccttttgatattggtcatagtagaaatctggagtcatgat acacacggctacctttgccagcctgaccatgttcctaccgcatactacttgggagccgcaatacgtatagtattctacaa tgtagttgctgtaatcattcagtacatcagaataaaacgtgttcatagttcaggaattttgtattccttctggtttttat tgctggtgtcatcaattattcctctacaatggaaaatatcatttcagccttcatgtccaaacagcattgtgtactatgca aatttcgctgtcgtagtgattcagttagtgcttcattcttttgctgacaaagagaggaagccgggttaccaggatctagg acagaaagtacgatgtccagaaagtcaatcctccaccttgaacaaattgacattttggtggctcagcagtgtagtaatga aagcatacaaacggacgatcggaattaaagatctatgggaacagactccggacttacagtcagacatttgtatccctgaa ttagaaaaggaatggtacaaggaagttgaacagtgtaaaagtgcaccagtgaggacagaaagcattgtttacaagagaag atcaaacatacttgaaaaacaaaacaatggaaaggcagaagatgaacctttattgcccaacaaagaatacgcagaatttt ataggaaagttgaacctgaaaaaagaccctcattatacaaagctttgatacgtacttactggaaaacgtggattttttca tgtctgttgaagattatagacgacgtttttgcactggggcagccatttcttctgaaatacatcatcgctcttatcgaaaa caaagaccccacccagccgacagactggactggatatactttggctattctatttttcttgtccggaatggggactacag tattcttcagtcaagcaggttttcaaatgatgagacttggtttacaagtcaaaacagctgtcattggtttgatatatcga aaggccttaacaatgagcaatgcatccaagaagaactacaccgttggtgacatcgtcaacttaatgtcagtggattgtca gcgtgtccaaaatggcttccaattacaatacgaggtagtgtctttcttcgtcatggtcggtctgggcctgtacctggtgt ggatagagatgggcctagccaccctgggctgcatggctgccatacttatagtggctggtcttaacatcttgatgggaaaa attcagcagaaaattcaattagccattctgaaaatgaagagtagcagaattagattgcttaaagaagtacttaatggtat taagatgacgttttctgtactccttatctacgttgctatgtcaggaagtagctatctaagtgcagctaaagttttcacgg ctgtttccactgtaaatatacttcgtttctcactgagcatggtaccatacgtcatttccggtgttacacagctgattgtg tcactcggacgaattcaagctttcttgtggaaagaggatttagatctcagcaatgtttcaaattcagataattcagatca tgctatttccatagaaaatggttcatttacatgggacagagaagacccgaatgttacactgaaaaatatagaggtcaaag ttcccgatggtaagctcgttgctgttgttggacaagtcgggtctgggaaatcctccttgatttctgcaattcttggtgaa cttgaaaaactaagtggagaggttaacgttaagggatccgttgcttacgttcctcaagaggcatggatacagaatctgac ggtcaaagacaacattctcttcggagagaaatacagtaagaggaagtacgaaaaagtcatcaaggcatgcgcactactac cggacctcgctattttgtctgctggtgaccaaacagaaatcggtgaaaagacaaggatcttggttacccatggtatacat tggttaccgatggtggatacaataatagtcatggagaaagggcggatccgggaggtgggaacatatgacgaactccttca acgtaaggatgcctttgcccactttctacaaacctgtctgctccagaatgatccagacgaagatggcgaggataaagaaa ttacaaaaatgaaagaccaaatactggtacaagtggagagtgctctatcagattacgaaggaatatctgctgatgaaagc tggtcgagaagaattgcaagcagaaaatcatcaagagctttccaaaaggatgacaaacagtcgtctgtcaggctcgcgaa gggcgggatagctgacaaggatcccaaacgtgagattcagagacagatttcagagaatctatcggctctcacagagagct tgtcacgtggtaacgtagccacactcagtgacgccatctctgatgggacaaaccttccttacgacgaggagaaggacaat aaagacagaaacaaaaattcagctggtaatcttacaacggaggaaactacaaaaattggatcggctgattggataatacc aagtcgtcgtccgcactcatcatggccagaaacaggtaacatcaaattcaaagactacaccactagatacaggcctggat tggaccttgttctgaaagggataaattgtaacatcaaagatggtgaaaagataggaattgtgggcagaactggagctggt aagtcctcaatgacactttccttgttcaggctgatagaggccgctggtggaggaatcgacatagataacgtgaggatttc tgagttagggcttcatgatctcagatcaaaggtcacaattcttcctcagttggtgtgtttggcccggactctgctccata aaaccaaggtgctgatattggatgaagctacggcagctgttgacatagagacagacgaactgatccaggagacaatacgg acggaattctcagagtgtacagtactaactatagctcacagactcaacacagttatggactatgataggatcatggtttt ggacaagggacttattgtcgaatttgattcaccaaaggaactgctaaaaggaaggaaaattaaccaaacgaattcattaa gtaatttttttgtcctgatggtagatacgaacgcttcgttctccagctcttcaaatcagttttgcggatctgatctttgg aatgatgacgtgttatcgggagatgctccagctttcacgccctgtttccaagacacggtcctggtgtatataccatttgg atggctccttgtctccatgccgttataccttcgctttctcttgaagaaaccgcctggaccagatttaccagtttcggcat tgagcttatctaaatcaatattgtgtgttgtattggccatattggtggtcgtagaaatgtggatgcatgataaatacatg tatctgtgccagtttgacgacgttccaatatcttaccacgttggagcagccgtccgaatcgtatcctttgtgttccttgt attcgccattcagtttataaggaaaaaacatgaatacaaatctggtgttctgtacatgttctggtctttgctgttgatgt cctcaattatcccattacaatggaaaatatcctttcagccatcttgcccaagcagtatcctgtactatgtttactttgct gcaattatagtacagattgtgctacattctttcatcgacaaagaccgcgaacaagaatacactaacgtggatgagaaatc ggactgtccagagagtaaggcctctgtcatgaacaagcttacattctggtggttgaatggtgtcgtcacaacagcttaca agaggacgatagggataaaagacctttggaagcaaactccagacttacagtcagacacatgtatacctgctatagagaag gagtggtatagggaggtcgagagatgtaaaagaggtccagcaaggtcacaaacaatcatctacaaaagacaatctgtaat aaatggcaatatacgtaatgatctgaagagtgagaaagaacctttactgcaaaagaatgattatacagaattctacaaga aagatgaccagactgttagaaagccatccgtcagttggatattggtccgcacgtactggaagccatgggttttctctgct ttaatcaggatattggcagacgtctttgcgctttctcaaccatttattttgactttcattatcgactatattgagagtaa ggggccaaatgatagtacagactggaggggctacacattagccgtcttgtttttcttgtttgggattataatgtccgttt tcttcagtcaatcgggattcattatgatgagattgggactaaaagtgaaatcagctctgattggtctgatttatcggaag gctttgacaataagtaatgcatccaaaaagaactattcagttggtgacatagtgaatttaatgtcagttgactgtcaacg tattcaaaatgggtttcaacttcaacatgagatagtttcatttgtggacgtcatgatcctaggtttgtacctagtgtgga tggaaatgggtacggcaacattaggaagtattgccattattatcatttttggtggtctgaacctcatgttagggagattt cagcagatatatcaaactgtcatactgaaaatgaaaagcagtcggatcaggcttctgaaagaagttctgaatggcatcaa ggtattgaaaatgtacacatgggagccagtttttaccagcaaattactgagtatccgtgcgaatgagatgacatacatga gaaagtacgccaatgcctcatccttcgccatgttactatctgttcacagtccgttctttatgacgttttcaatccttctt ctctacgtcttcatgtcagaggacggttatctcagcgcctctaaagtctttacagctctgtccacaattaacatagtgag atttgaattaggcgtcatgccttatgtcatcacaggtgtcactcagttaattgtatcattgggaagaatacaggactttt tgtgcaaggaagatatcgatgaagagaatgtttcccattgtcaacagtctgattatgcagtttcaattgaaaacggaaca ttcagttgggatagaacggatccaaacataactttgaaagacatagaagtcaaggttccagaaggaaaacttgtagctgt tgtgggacaagtgggctctggaaaatcgtctttgatatcagccattctcggtgaacttgaaaagctctctggaaaagtga acgttaagggtacagtcggttatgtgccacaagaagcttggatacaaaacttaacagtcaaggaaaatattttgttcggc gaaaaattttctaggaaaaagtaccagaaggttattactgcttgtgcactgctacccgatcttgcaattttatctgctgg ggatgaaacggaaataggggaaaagggaataaacgtgagtggaggacagaaacaacgtataagtttggccagagctgtgt ataacaactgtgacgtatatctattggatgatccattgtcagctgtggacagtcatgttggaaaagatttattcaagaat gtcatcggcaataatggtctcctcaaaaacaagacaagaattctggtaacacatggtatacattggttaccgatggttga catgataattgtgatggataacggacgggtcagggaaatgggaacctatgaggaactcctacaacgtaaagatgtatttg cccattttctacagagttgcttacttcaaagcaaccccgatgatgataatgaagataaagatatttcaaagatgaaagac aaaatgctagtacaagttgagagtgctctatcagattacgaaggcatgtctaccgaagagagtctatcaagaaagataac cataagcgtttccatggatatcccagtccacagtgggagaaatatacttctttcacttcgaattgaatttgatattgagc ttattttgcaagctaaattagaaggggacggacagggtaagaggaggggaggggtgggaggaaggaggaaaggagcggag gtgggatctagggggacagtctctggcatagtgtcccgtgccttggcacttgtagcaaatgtcgttctgcttcttgggcg gctgaggacattcggtagcaatgtgtccctcttcattgcagttgaagcaaacgtatctggctttcttcttgggcgataca tagacgatgtgttgtccatcaataatccaaaattcgcggattacctgagcagtatctatcccccggagcttgaagtcaaa gaaactacagagacaaataattcagcatcctatttggacataatgttgtcctacgacactgatggtcacataaacacctc actctatgacaaacgtgacgacttcaattttagcattacaaactttccttttatgagtagcaacatccattcatcgcctg cttttggcgtgttcatatctcagttgatacgctatgccagagcaagtaccaaatatacggattttgttttgagagctagg cgtctttcagataagcttctcagtcagggatatgtatgtgaccgactaacatcgtcattgaggaagttctacggtcgata tggggaactcgtcatatactatggtgtctcactctccagaatggtggatgatattctgtcatag |
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Protein
| Protein ID | pfu_aug2.0_360.1_00649.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_360.1_00649.t1 MQCNDDVLSGDAPAFTPCFQDTVLVYVPFGWLLVTLPFYIRYLLKKPPGSSLPVTTISVIKSVLCLVLLILVIVEIWSHD THGYLCQPDHVPTAYYLGAAIRIVFYNVVAVIIQYIRIKRVHSSGILYSFWFLLLVSSIIPLQWKISFQPSCPNSIVYYA NFAVVVIQLVLHSFADKERKPGYQDLGQKVRCPESQSSTLNKLTFWWLSSVVMKAYKRTIGIKDLWEQTPDLQSDICIPE LEKEWYKEVEQCKSAPVRTESIVYKRRSNILEKQNNGKAEDEPLLPNKEYAEFYRKVEPEKRPSLYKALIRTYWKTWIFS CLLKIIDDVFALGQPFLLKYIIALIENKDPTQPTDWTGYTLAILFFLSGMGTTVFFSQAGFQMMRLGLQVKTAVIGLIYR KALTMSNASKKNYTVGDIVNLMSVDCQRVQNGFQLQYEVVSFFVMVGLGLYLVWIEMGLATLGCMAAILIVAGLNILMGK IQQKIQLAILKMKSSRIRLLKEVLNGIKMTFSVLLIYVAMSGSSYLSAAKVFTAVSTVNILRFSLSMVPYVISGVTQLIV SLGRIQAFLWKEDLDLSNVSNSDNSDHAISIENGSFTWDREDPNVTLKNIEVKVPDGKLVAVVGQVGSGKSSLISAILGE LEKLSGEVNVKGSVAYVPQEAWIQNLTVKDNILFGEKYSKRKYEKVIKACALLPDLAILSAGDQTEIGEKTRILVTHGIH WLPMVDTIIVMEKGRIREVGTYDELLQRKDAFAHFLQTCLLQNDPDEDGEDKEITKMKDQILVQVESALSDYEGISADES WSRRIASRKSSRAFQKDDKQSSVRLAKGGIADKDPKREIQRQISENLSALTESLSRGNVATLSDAISDGTNLPYDEEKDN KDRNKNSAGNLTTEETTKIGSADWIIPSRRPHSSWPETGNIKFKDYTTRYRPGLDLVLKGINCNIKDGEKIGIVGRTGAG KSSMTLSLFRLIEAAGGGIDIDNVRISELGLHDLRSKVTILPQLVCLARTLLHKTKVLILDEATAAVDIETDELIQETIR TEFSECTVLTIAHRLNTVMDYDRIMVLDKGLIVEFDSPKELLKGRKINQTNSLSNFFVLMVDTNASFSSSSNQFCGSDLW NDDVLSGDAPAFTPCFQDTVLVYIPFGWLLVSMPLYLRFLLKKPPGPDLPVSALSLSKSILCVVLAILVVVEMWMHDKYM YLCQFDDVPISYHVGAAVRIVSFVFLVFAIQFIRKKHEYKSGVLYMFWSLLLMSSIIPLQWKISFQPSCPSSILYYVYFA AIIVQIVLHSFIDKDREQEYTNVDEKSDCPESKASVMNKLTFWWLNGVVTTAYKRTIGIKDLWKQTPDLQSDTCIPAIEK EWYREVERCKRGPARSQTIIYKRQSVINGNIRNDLKSEKEPLLQKNDYTEFYKKDDQTVRKPSVSWILVRTYWKPWVFSA LIRILADVFALSQPFILTFIIDYIESKGPNDSTDWRGYTLAVLFFLFGIIMSVFFSQSGFIMMRLGLKVKSALIGLIYRK ALTISNASKKNYSVGDIVNLMSVDCQRIQNGFQLQHEIVSFVDVMILGLYLVWMEMGTATLGSIAIIIIFGGLNLMLGRF QQIYQTVILKMKSSRIRLLKEVLNGIKVLKMYTWEPVFTSKLLSIRANEMTYMRKYANASSFAMLLSVHSPFFMTFSILL LYVFMSEDGYLSASKVFTALSTINIVRFELGVMPYVITGVTQLIVSLGRIQDFLCKEDIDEENVSHCQQSDYAVSIENGT FSWDRTDPNITLKDIEVKVPEGKLVAVVGQVGSGKSSLISAILGELEKLSGKVNVKGTVGYVPQEAWIQNLTVKENILFG EKFSRKKYQKVITACALLPDLAILSAGDETEIGEKGINVSGGQKQRISLARAVYNNCDVYLLDDPLSAVDSHVGKDLFKN VIGNNGLLKNKTRILVTHGIHWLPMVDMIIVMDNGRVREMGTYEELLQRKDVFAHFLQSCLLQSNPDDDNEDKDISKMKD KMLVQVESALSDYEGMSTEESLSRKITISVSMDIPVHSGRNILLSLRIEFDIELILQAKLEGDGQGKRRGGVGGRRKGAE VGSRGTVSGIVSRALALVANVVLLLGRLRTFGSNVSLFIAVEANVSGFLLGRYIDDVLSINNPKFADYLSSIYPPELEVK ETTETNNSASYLDIMLSYDTDGHINTSLYDKRDDFNFSITNFPFMSSNIHSSPAFGVFISQLIRYARASTKYTDFVLRAR RLSDKLLSQGYVCDRLTSSLRKFYGRYGELVIYYGVSLSRMVDDILS |
|