Gene
| Gene Model ID | pfu_aug2.0_360.1_00651 |
|---|---|
| Locus | scaffold360.1 : 165956 ... 182763 : + |
| To GenomeBrowser | scaffold360.1:165956..182763 |
| Genes list of scaffold | scaffold360.1 |
| Synonym | pfu_aug1.0_100.1_43467 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_360.1_00651.t1 | 3 | 1 | zf-CCHC | 3 | 19 | 2.9e-14 | 52.2 | 1.3e-10 | 2.4e-07 | 30.3 |
| pfu_aug2.0_360.1_00651.t1 | 3 | 2 | zf-CCHC | 27 | 42 | 2.9e-14 | 52.2 | 2.9e-10 | 5.4e-07 | 29.2 |
| pfu_aug2.0_360.1_00651.t1 | 3 | 3 | zf-CCHC | 133 | 135 | 2.9e-14 | 52.2 | 6.3 | 12000.0 | -3.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_360.1_00651.t1 | gi|676437201|ref|XP_009048126.1| | hypothetical protein LOTGIDRAFT_238308 [Lottia gigantea] | 1.0e-25 |
| pfu_aug2.0_360.1_00651.t1 | gi|694644508|ref|XP_009479876.1| | PREDICTED: uncharacterized protein LOC104030029 [Pelecanus crispus] | 2.0e-06 |
| pfu_aug2.0_360.1_00651.t1 | gi|365988276|ref|XP_003670969.1| | hypothetical protein NDAI_0F04080 [Naumovozyma dairenensis CBS 421] | 3.0e-06 |
| pfu_aug2.0_360.1_00651.t1 | gi|366986513|ref|XP_003673023.1| | hypothetical protein NCAS_0A00720 [Naumovozyma castellii CBS 4309] | 8.0e-06 |
| pfu_aug2.0_360.1_00651.t1 | gi|736307355|ref|XP_010795002.1| | PREDICTED: multiple epidermal growth factor-like domains protein 11 [Notothenia coriiceps] | 1.0e-05 |
Transcript
| Transcript ID | pfu_aug2.0_360.1_00651.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_360.1_00651.t1 atgagtttatgcttcaactgtaatgaagagggacattttgctaccgaatgtcctcagccgcccaaaaagcagaatgacat ttgctacaagtgccaaggcacgggacactgggccagagactgtcgtgtacaacaggaatacaacacgaatcaaaacaact caagtacggtggcataccagactgttatcacctaccgcggcgaaaggatttgtgccagttatacttggttttggtgtagt aggcatagatggatatatcatccagtctatggtatcaggtataaatgtgctccaggttatggaggttcaagctgttcacc gatatgccagccagcatgcaaaaatggggcctgcacgagtcctggttattgtaaatgtgatgctgcttttcaaggaagag actgcggaaaaattgaagatagtcagaagccaaaggtgacgagatgtactacaaaacttatcaatctggaacgttcaacg cagaaggaacaataccgctacgttgcggattcttcctcaccagatatttcagaaccagacgtaatgtggtcaaatcagag agatttcaacttcataaatatatatttcgaaggccaatacgaatcaccagaaatagtaacgacgcctgattacatacgtt attataaatttggagttaccagtggaagcgttaagatagaacatacaaagataccaagaaaaggggagccgccaccagat atcaaaccgctatcctttccgtgcgagaactcaccaggaccacaaaatccggaaacggagaccttcaagtgtaacataac acgaagtgattatacaacttcgttcgaatccggagacaatttaacagtatcagtattcatatacaacggtggatatagga atataattcgttcttatagaaatattcagacacaggattatgtggggcaatatcagagaaaaagtatgatattcaaattt gacttcgggaaaccttattatagcaccacgacaaccaatcagacactatttttgtatgtgtcagaagaaatcacaaaggt aaatttcgatgaaacactatccaaatattttcaagcactgagtgtttttgatcctaggaagctaacccgtcagggttgct tccgatatctgtttaaggttgaaaacccataa |
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Protein
| Protein ID | pfu_aug2.0_360.1_00651.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_360.1_00651.t1 MSLCFNCNEEGHFATECPQPPKKQNDICYKCQGTGHWARDCRVQQEYNTNQNNSSTVAYQTVITYRGERICASYTWFWCS RHRWIYHPVYGIRYKCAPGYGGSSCSPICQPACKNGACTSPGYCKCDAAFQGRDCGKIEDSQKPKVTRCTTKLINLERST QKEQYRYVADSSSPDISEPDVMWSNQRDFNFINIYFEGQYESPEIVTTPDYIRYYKFGVTSGSVKIEHTKIPRKGEPPPD IKPLSFPCENSPGPQNPETETFKCNITRSDYTTSFESGDNLTVSVFIYNGGYRNIIRSYRNIQTQDYVGQYQRKSMIFKF DFGKPYYSTTTTNQTLFLYVSEEITKVNFDETLSKYFQALSVFDPRKLTRQGCFRYLFKVENP |
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