Gene
| Gene Model ID | pfu_aug2.0_360.1_00652 |
|---|---|
| Locus | scaffold360.1 : 193386 ... 205465 : - |
| To GenomeBrowser | scaffold360.1:193386..205465 |
| Genes list of scaffold | scaffold360.1 |
| Synonym | pfu_aug1.0_547.1_00385 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| kelch-like protein 20-like | GO:0004842 GO:0005802 GO:0006895 GO:0016605 GO:0019964 GO:0031463 GO:0043066 GO:0043161 GO:1990390 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_360.1_00652.t1 | 1 | 1 | BTB | 23 | 127 | 2.8e-22 | 78.7 | 4.6e-25 | 5.3e-22 | 77.9 |
| pfu_aug2.0_360.1_00652.t1 | 3 | 1 | zf-C2H2 | 325 | 347 | 2.6e-11 | 43.1 | 2.1e-05 | 0.024 | 14.9 |
| pfu_aug2.0_360.1_00652.t1 | 3 | 1 | zf-C2H2_4 | 325 | 347 | 5.3e-08 | 32.6 | 0.0015 | 1.8 | 9.1 |
| pfu_aug2.0_360.1_00652.t1 | 3 | 2 | zf-C2H2 | 382 | 404 | 2.6e-11 | 43.1 | 5.1e-07 | 0.00058 | 20.0 |
| pfu_aug2.0_360.1_00652.t1 | 3 | 2 | zf-C2H2_4 | 382 | 404 | 5.3e-08 | 32.6 | 0.00027 | 0.31 | 11.4 |
| pfu_aug2.0_360.1_00652.t1 | 3 | 3 | zf-C2H2 | 408 | 430 | 2.6e-11 | 43.1 | 1.3e-07 | 0.00015 | 21.8 |
| pfu_aug2.0_360.1_00652.t1 | 3 | 3 | zf-C2H2_4 | 408 | 430 | 5.3e-08 | 32.6 | 3.8e-07 | 0.00043 | 20.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_360.1_00652.t1 | gi|676463192|ref|XP_009056517.1| | hypothetical protein LOTGIDRAFT_162307 [Lottia gigantea] | 9.0e-18 |
| pfu_aug2.0_360.1_00652.t1 | gi|524864042|ref|XP_005088859.1| | PREDICTED: kelch-like protein 20-like [Aplysia californica] | 4.0e-16 |
| pfu_aug2.0_360.1_00652.t1 | gi|260828611|ref|XP_002609256.1| | hypothetical protein BRAFLDRAFT_86834 [Branchiostoma floridae] | 6.0e-16 |
| pfu_aug2.0_360.1_00652.t1 | gi|585688095|ref|XP_002738123.2| | PREDICTED: kelch-like protein 20-like, partial [Saccoglossus kowalevskii] | 1.0e-15 |
| pfu_aug2.0_360.1_00652.t1 | gi|706143441|ref|XP_010204137.1| | PREDICTED: kelch-like protein 20 [Colius striatus] | 1.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_360.1_00652.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_360.1_00652.t1 atggcctctgctcctttgtctatggtataccagagtgaacaacagattccacgactcactcagtctctcaaggacttcta cagatcggaggatttctgtgatgttaccctcgtcgtaggctccaagcgcatacatgcccataaagtcatactggcctcat tcagcccattcttctatcagagtctgaagatccaggggtcatatcatacagagttgccatgtgaccagtttgatgagaat gtactgaagagccttgtagatttctgctatcttggttctatcactgtcgattcagtatcagcctctcagatgctcagtgc agctattactctacagataaaggaagtggaaaaactatgtcttactttcttgagagcacatcagtcttttgtatgtgaga tttcctcagatgtagctagttcaagaccagaacaagcgagtgagagttcccatcgtgtagagagttcaggtagatttagc ccacacagaagtcctaatgtatccacctcaggtcgacctctgtcagagacaagctcagctgataatactgatccagaaat aaccatcaaacaagaacaacatgagtcagggaatgagagtgatagttcttttcttcggagacacagcagtgacagcagtc cagtaagccctttcaggaaatttcccatcatgacatcacagggtgtaaatgtagttgacgtgacacagatgtcccccacc tttatggggcctctctatcccaggccaatcctctttccacgtcccacacccccacaactccagctctaccatcccagggt tccgctgccgtcatcagaatcagagagtcctgcactgcaatcaccagagcaaggcaaatctctgaaaggcgatttgactc agaagcactctagtcctagtctagacattgtaagccagtcactacaagctgccgaattgcctagtcctgtagatatatcc ccatctgacccttattcttgcccaatatgtaaacaacgctatggctcatcacaagcattgttacttcatatgatgcttca tgaccatgtacagaaccccactcctacagtgaagaaaagtagaaaatctcacaccccgcaaaagaaagagaaaattgtta ttgaggaagattcgaatggaagtttttcatgtgaaacatgcggtaaaagtttcaaggatgcccagtccttgaaatttcat cgttacaaccatgttctacgacacccttgcaatatatgtggaaagcgttttagcagatgttggaatttgcagagacataa aaagtctcattttaagatgggaaattggccttcagcatcgttaggtgctccgtatcaagagggaaaagacatagaaaaca tggaggagggaatggataacccaggagaagatgaagatgtatcggtagaagctctagatctgagggacggtgataggagt cgggagaatgtaagtcctaaggacaatgataccgatgtgccggcacataaagctggtctgtaa |
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Protein
| Protein ID | pfu_aug2.0_360.1_00652.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_360.1_00652.t1 MASAPLSMVYQSEQQIPRLTQSLKDFYRSEDFCDVTLVVGSKRIHAHKVILASFSPFFYQSLKIQGSYHTELPCDQFDEN VLKSLVDFCYLGSITVDSVSASQMLSAAITLQIKEVEKLCLTFLRAHQSFVCEISSDVASSRPEQASESSHRVESSGRFS PHRSPNVSTSGRPLSETSSADNTDPEITIKQEQHESGNESDSSFLRRHSSDSSPVSPFRKFPIMTSQGVNVVDVTQMSPT FMGPLYPRPILFPRPTPPQLQLYHPRVPLPSSESESPALQSPEQGKSLKGDLTQKHSSPSLDIVSQSLQAAELPSPVDIS PSDPYSCPICKQRYGSSQALLLHMMLHDHVQNPTPTVKKSRKSHTPQKKEKIVIEEDSNGSFSCETCGKSFKDAQSLKFH RYNHVLRHPCNICGKRFSRCWNLQRHKKSHFKMGNWPSASLGAPYQEGKDIENMEEGMDNPGEDEDVSVEALDLRDGDRS RENVSPKDNDTDVPAHKAGL |
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