Gene
| Gene Model ID | pfu_aug2.0_360.1_00653 |
|---|---|
| Locus | scaffold360.1 : 221446 ... 228615 : + |
| To GenomeBrowser | scaffold360.1:221446..228615 |
| Genes list of scaffold | scaffold360.1 |
| Synonym | pfu_aug1.0_547.1_00384 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| proteasome subunit alpha type-5 | GO:0000084 GO:0000090 GO:0000209 GO:0002479 GO:0004298 GO:0005515 GO:0005654 GO:0005829 GO:0006521 GO:0006977 GO:0010467 GO:0016032 GO:0019773 GO:0031145 GO:0043066 GO:0051436 GO:0051437 GO:0070062 GO:0090090 GO:0090263 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_360.1_00653.t1 | 1 | 1 | Proteasome_A_N | 8 | 30 | 2.1e-14 | 52.5 | 4.8e-18 | 3.6e-14 | 51.7 |
| pfu_aug2.0_360.1_00653.t1 | 1 | 1 | Proteasome | 31 | 220 | 0.0 | 202.8 | 0.0 | 0.0 | 202.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_360.1_00653.t1 | gi|676454931|ref|XP_009053841.1| | hypothetical protein LOTGIDRAFT_232029 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_360.1_00653.t1 | gi|524910383|ref|XP_005110071.1| | PREDICTED: proteasome subunit alpha type-5-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_360.1_00653.t1 | gi|504139156|ref|XP_004582031.1| | PREDICTED: proteasome subunit alpha type-5 [Ochotona princeps] | 0.0 |
| pfu_aug2.0_360.1_00653.t1 | gi|602648136|ref|XP_007430487.1| | PREDICTED: proteasome subunit alpha type-5 [Python bivittatus] | 0.0 |
| pfu_aug2.0_360.1_00653.t1 | gi|597782100|ref|XP_007254604.1| | PREDICTED: proteasome subunit alpha type-5 [Astyanax mexicanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_360.1_00653.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_360.1_00653.t1 atgtttctcacaagatctgagtatgacagaggtgtcaacacattctctccagaaggaagattgttccaagtggaatatgc tattgaagctataaagttgggctccactgccataggtatccaaacaaatgaaggagttgtattggcagtggaaaaaagag ttacctcccctcttattgagcctgccagcatcgaaaaaatatttgaagtagatgatcatatagcttgtgcaatgagtggt ttgatagcagattccagaacattgatagacagggctagggtagaggcacagaaccactggtttacatataacgagaagat gtcagtagagagtgtcactcaggctgtcagtaatttagccttacagtttggtgacgatgatgctgacccaggagctatga gccgtccatttggtgttgcgttgttatttgctggtattgacaagaaaggtccacaattatttcacatggatccatcaggg acgttcattcagtacgatgctaaggctataggctcaggatctgaaggtgctcagcaagcgttacaggatgtctaccataa gtcaatgactttaaaagaagcctgcaaatctgctttaaccattcttaaacaagtaatggaagaaaaactcaattcaacaa atgtagagatgggaactgtaacacctcagagaaaattccacatgttcacgaaagaagaattagaagatgtaattaaagac atataa |
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Protein
| Protein ID | pfu_aug2.0_360.1_00653.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_360.1_00653.t1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTNEGVVLAVEKRVTSPLIEPASIEKIFEVDDHIACAMSG LIADSRTLIDRARVEAQNHWFTYNEKMSVESVTQAVSNLALQFGDDDADPGAMSRPFGVALLFAGIDKKGPQLFHMDPSG TFIQYDAKAIGSGSEGAQQALQDVYHKSMTLKEACKSALTILKQVMEEKLNSTNVEMGTVTPQRKFHMFTKEELEDVIKD I |
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