Gene
| Gene Model ID | pfu_aug2.0_360.1_00654 |
|---|---|
| Locus | scaffold360.1 : 232626 ... 244617 : + |
| To GenomeBrowser | scaffold360.1:232626..244617 |
| Genes list of scaffold | scaffold360.1 |
| Synonym | pfu_aug1.0_547.1_00384 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_360.1_00654.t1 | 2 | 1 | Fasciclin | 30 | 118 | 0.0 | 175.0 | 4.0e-25 | 5.9e-21 | 74.7 |
| pfu_aug2.0_360.1_00654.t1 | 2 | 2 | Fasciclin | 125 | 220 | 0.0 | 175.0 | 1.6e-32 | 2.4e-28 | 98.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_360.1_00654.t1 | gi|524913364|ref|XP_005111513.1| | PREDICTED: transforming growth factor-beta-induced protein ig-h3-like [Aplysia californica] | 3.0e-26 |
| pfu_aug2.0_360.1_00654.t1 | gi|37521719|ref|NP_925096.1| | 5.0e-26 | |
| pfu_aug2.0_360.1_00654.t1 | gi|260836164|ref|XP_002613076.1| | hypothetical protein BRAFLDRAFT_89958 [Branchiostoma floridae] | 1.0e-24 |
| pfu_aug2.0_360.1_00654.t1 | gi|410671284|ref|YP_006923655.1| | 3.0e-24 | |
| pfu_aug2.0_360.1_00654.t1 | gi|260824165|ref|XP_002607038.1| | hypothetical protein BRAFLDRAFT_127065 [Branchiostoma floridae] | 7.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_360.1_00654.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_360.1_00654.t1 atggacgacatcatttacgaagacaatctcggaaacctgatgaaccaaaggagatgcaatattcttgatgtggcaaggca gttgggggcgaccactttacttgaactggtcaacgatgctggaataacggacgtcctaaccgttggagatcctctcaccc tttttgctccatcaaacgaggcattcagtaatcttccagcgagcattcttaacgagctgaaagacgacaaacaactgcta gccgatgtcttgaagtatcacgtactgaatggtagagtatctatcagcatgcttgccaatgagctggttgtgccaactct actggatggttctacaagcagagtaaacatttaccaaggtcctgttcctagaccactgacactgtttgcgcccactgacg acgcttttaatgctctaccaccaggaacactcgacgcactccttaaagacaaaacagctcttatagatttattgacttac catgcggtcaatggaacttattacagcatcggtttgacaaatgggacttatccgactgtagagggaaaatctgtcactat tgctgtcgatactgacggtattacagtgaacgatgctaaagtaaccactgccgatgtcccaggaactaacggcgtccttc acgtcattgacaaagtcctaacgttgccgagctcattcaggattcaatag |
|
Protein
| Protein ID | pfu_aug2.0_360.1_00654.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_360.1_00654.t1 MDDIIYEDNLGNLMNQRRCNILDVARQLGATTLLELVNDAGITDVLTVGDPLTLFAPSNEAFSNLPASILNELKDDKQLL ADVLKYHVLNGRVSISMLANELVVPTLLDGSTSRVNIYQGPVPRPLTLFAPTDDAFNALPPGTLDALLKDKTALIDLLTY HAVNGTYYSIGLTNGTYPTVEGKSVTIAVDTDGITVNDAKVTTADVPGTNGVLHVIDKVLTLPSSFRIQ |
|