Gene
| Gene Model ID | pfu_aug2.0_361.1_04051 |
|---|---|
| Locus | scaffold361.1 : 92596 ... 118426 : + |
| To GenomeBrowser | scaffold361.1:92596..118426 |
| Genes list of scaffold | scaffold361.1 |
| Synonym | pfu_aug1.0_9759.1_68083 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tbc1 domain family member 23 isoform x2 | GO:0050789 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_361.1_04051.t1 | 1 | 1 | RabGAP-TBC | 107 | 304 | 6.1e-25 | 87.9 | 2.5e-28 | 1.2e-24 | 86.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_361.1_04051.t1 | gi|676425111|ref|XP_009044301.1| | hypothetical protein LOTGIDRAFT_229906 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_361.1_04051.t1 | gi|585644414|ref|XP_006813860.1| | PREDICTED: TBC1 domain family member 23-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_361.1_04051.t1 | gi|91080259|ref|XP_973356.1| | PREDICTED: TBC1 domain family member 23 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_361.1_04051.t1 | gi|403306105|ref|XP_003943585.1| | PREDICTED: TBC1 domain family member 23 isoform X2 [Saimiri boliviensis boliviensis] | 0.0 |
| pfu_aug2.0_361.1_04051.t1 | gi|724851889|ref|XP_010367139.1| | PREDICTED: TBC1 domain family member 23 isoform X3 [Rhinopithecus roxellana] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_361.1_04051.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_361.1_04051.t1 atgcgtacagagggatgcagcgatcggaaatcaatgggtcctgggcaatttttatgtgtcagggatgcaggacgcagagt taccggtagattgatcattgttaataatccctgtagttgtaaagaaactaaaagtaaaaatgtaaaaagaggaaactatt tacgacaacagtcccacttacgattacacgtcaaaactgtcatggcggacgatatagaagacactagctggatcacagac cttgagacggctctagttgatggttgtgatttcggaacgctgagaaatatatgtaaatgtcgacctgtaccaggtcatct acggaatgaaatatggcagatatgcttgggagtacaaggtagaagtaacgctttgtcggccttcgatggtttgtacgacc ttgaggaacaaggattgataagagaggattgtcgtgttttagtagataacctcggaaacgatgaagaggataaagtttca gtcgtcagtgatttagaatctataattacattttactgtaagtcccgtaacgagacgtatgccacagacaatggctggtt agagattatacaaccgttgctcgccctgaaactgtcgcgagccgagctgtataactgcttctactctatcatcaataaat ttataccaagggagtgttcaaaaggaggtcagccgttccatctatttcgcttactcctacagtatcatgatccagaactc agctcctttctcgataccaaaaaaatatcagctgacaactacgcacaaagctggttccgtagtttgtttgcggcaccatg tgaccttcaggtcatacagaacatgtgggatgtctattttcagcagggagatcagttcctcgtcttcttcatggctctcg ttattctagtcaacgcaagggaccaaattttgagtggagagctagagggaaaacaagcaatagtagaaatgttgtcggct ttcccgtcgggattggaggcggaggacattgaggatttctgttccctagcccagtactacgctaccaaaacacctcagtc tttcagaagggatttccacagtgatatatttggtggtagtatagtcccgtctagagacgatgcagaaatttccgtagctc aggttctatgtctgccggtatctgtgtcagagataattcagactaataatccagcagggggcgatggagtacgatatttt atcgtagattgccgaccggccgatcagtataacagtggacatctacacacagcatttcatcttgatgcaaaccttatgtt acagaatcccatggaatttaacacagcagtacaggcattactggcagctcaacaacaggcaatatcagcaggttctgttg ctggaggagaacacctgtgttttatgggcagtggtagagaagaagaagatcaatatgtttatatggtgatagccaacttt ctacagaaacactacctctatgttagttttgctaggggagggtactcagctgtccatgatttaatgggtgtcaattcatc agacggattaacagatcattttgtacagtcctgtatcgtgtctaatcctgatgccgctggctcccagagtgatctggaga gcggagatgaccttagtaaagacaaggccgagtcgtcgtttttcgataaattttctagtgttgtgaaatccaagtcagct gtgatgaaacaaaaaataaccgattatattaaaaatgaacaacagatgccagaaagaatccatagcatacgagaaactga cgagcaggtagcgggatcatcagacgaagatcggagggagacggttaacctggacctgtggctgaacaaaccagaagttg tatatagctgtaaatgtcaggaagttctttctaatggttatatgtactcaagtcatgtgttagtgacttcctcccatcta tacgttctacgcgatgtcgaaggtcgtaaaaatgtcgcacaaatacaggcaagaagagctctaggaagtgttgtaaaaat aacgtcgaaaaagcgacaccctgaactgataacatttaaatatggctcgatggaaggagacaatgtcacagtgacagata tggacaggttcctaatgcctcgggcaggggaaactaccaaaattatcaaacaacaaataattaaagttctagaagccctg gacagctag |
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Protein
| Protein ID | pfu_aug2.0_361.1_04051.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_361.1_04051.t1 MRTEGCSDRKSMGPGQFLCVRDAGRRVTGRLIIVNNPCSCKETKSKNVKRGNYLRQQSHLRLHVKTVMADDIEDTSWITD LETALVDGCDFGTLRNICKCRPVPGHLRNEIWQICLGVQGRSNALSAFDGLYDLEEQGLIREDCRVLVDNLGNDEEDKVS VVSDLESIITFYCKSRNETYATDNGWLEIIQPLLALKLSRAELYNCFYSIINKFIPRECSKGGQPFHLFRLLLQYHDPEL SSFLDTKKISADNYAQSWFRSLFAAPCDLQVIQNMWDVYFQQGDQFLVFFMALVILVNARDQILSGELEGKQAIVEMLSA FPSGLEAEDIEDFCSLAQYYATKTPQSFRRDFHSDIFGGSIVPSRDDAEISVAQVLCLPVSVSEIIQTNNPAGGDGVRYF IVDCRPADQYNSGHLHTAFHLDANLMLQNPMEFNTAVQALLAAQQQAISAGSVAGGEHLCFMGSGREEEDQYVYMVIANF LQKHYLYVSFARGGYSAVHDLMGVNSSDGLTDHFVQSCIVSNPDAAGSQSDLESGDDLSKDKAESSFFDKFSSVVKSKSA VMKQKITDYIKNEQQMPERIHSIRETDEQVAGSSDEDRRETVNLDLWLNKPEVVYSCKCQEVLSNGYMYSSHVLVTSSHL YVLRDVEGRKNVAQIQARRALGSVVKITSKKRHPELITFKYGSMEGDNVTVTDMDRFLMPRAGETTKIIKQQIIKVLEAL DS |
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