Gene
| Gene Model ID | pfu_aug2.0_361.1_04054 |
|---|---|
| Locus | scaffold361.1 : 184077 ... 188744 : - |
| To GenomeBrowser | scaffold361.1:184077..188744 |
| Genes list of scaffold | scaffold361.1 |
| Synonym | pfu_aug1.0_6209.1_31131 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcriptional regulator erg isoform x1 | GO:0000976 GO:0003700 GO:0006355 GO:0044424 GO:0060218 GO:0097110 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_361.1_04054.t1 | 1 | 1 | Ets | 306 | 388 | 7.4e-37 | 125.3 | 8.30003e-41 | 1.2e-36 | 124.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_361.1_04054.t1 | gi|625210231|ref|XP_003507314.2| | PREDICTED: transcriptional regulator ERG isoform X1 [Cricetulus griseus] | 6.00036e-42 |
| pfu_aug2.0_361.1_04054.t1 | gi|125489448|gb|ABN42913.1| | Pet1 splice form E1up [Danio rerio] | 9.99995e-41 |
| pfu_aug2.0_361.1_04054.t1 | gi|507647154|ref|XP_004631822.1| | PREDICTED: transcriptional regulator ERG isoform X3 [Octodon degus] | 2.0e-40 |
| pfu_aug2.0_361.1_04054.t1 | gi|436277|gb|AAB28525.1| | immunoglobulin heavy-chain enhancer-binding Ets protein, partial [Mus sp.] | 2.0e-40 |
| pfu_aug2.0_361.1_04054.t1 | gi|560935338|ref|XP_006193497.1| | PREDICTED: transcriptional regulator ERG isoform X4 [Camelus ferus] | 2.0e-40 |
Transcript
| Transcript ID | pfu_aug2.0_361.1_04054.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_361.1_04054.t1 atgtattcagaaccaagtcattcaccttgtaatctgctgacagatgtattcctctgtgattttgataaagaaattgcctc tctggatatcgaccaatcaggacccgatattgacaacattgaccaatcggttcccgaccttgataatatagaaccaacca tagacttaaacccatcatcagatttctatcttgatatggataaagcattggcattccaaccgaaatgtccacccagttac tcggaacatatgagccgagttaactcaggatcgaatggcaatttgccgaacttactagtcgacacggattcatcggaaac tccagcgtgcagacgacttagtgacgtgttggaatgcatatcgaatgaaagtggatccgaatacaccccagatggtaaga tagattttatcgnattcctctgtgattttgataaagaaattgcctctctggatatcgaccaatcaggacccgattttgac aacattgaccaatcggtgcccgaccttgataatatagaaccaaccatagacttaaacccatcatcagatttctatcttga tatggataaagcattggtattccaaccgaaatgtctacccagttactcggaacatatgagccgagttaactcaggatcga atggcaatttgccgaacttactagtcgacacggattcatcggaaactccagcgtgcagacgacttagtgacgtgttggaa tgcatatcgaatgaaagtggatccgaatacaccccagatgatcgttttacacccacccctgaatccacccctgatcctat ccctagatgcagtacagattctccaatcatcgtcaaaacagagaaaaaatctactgccgctagagtatttgaggaaaacc ttaaacggattgcttctctgctttcttgtggaggtcaaatcaaattatggcagttcctactcgagctactctccgatgag gaaaacaccgactgtatccgatgggaggggacgactggtgagttccgaatggttgatccggatgcagttgcccggaagtg gggtcagcgtaaaaataaaccctccatgaactacgacaacatgagccgagcgctgagattctattacgacaaatttatat tgaacaaagtatccggaaaacgtcacacgtacaagttcaacttcaatgcaatcatcaattctatgcagagcggttctaca cagtcgtctagcagccagctacaatcaacactgtacgggctggtcaacaccctgtcaccgaatgtcacatgtggatacca gtatccaaactcgcgtccggtcagtcataatctgccgtaccctagtgccaattatacttccgcccagtatcctagcaatc gttaccatgacaacctagattttccacattgtgatacgctttacctacaaaacaaagaacttttcccagcttacgaggac acgaatggtttcagttcctgtcaatttgctcaaataaaccgatctcagaacatttcacaatgccagtacagcccttcatc gcagagctacacagatcaacgatatacaaaatctacgcatgcgctaaaggaagttaggacttcctgcgcataccagtcgc gcacccataatgctatgagatattcaccataccaccgctcaacgaatagcccgtgcaatggactagatcagaatccgctt tactctgctttgctgaactcgtactag |
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Protein
| Protein ID | pfu_aug2.0_361.1_04054.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_361.1_04054.t1 MYSEPSHSPCNLLTDVFLCDFDKEIASLDIDQSGPDIDNIDQSVPDLDNIEPTIDLNPSSDFYLDMDKALAFQPKCPPSY SEHMSRVNSGSNGNLPNLLVDTDSSETPACRRLSDVLECISNESGSEYTPDGKIDFIXFLCDFDKEIASLDIDQSGPDFD NIDQSVPDLDNIEPTIDLNPSSDFYLDMDKALVFQPKCLPSYSEHMSRVNSGSNGNLPNLLVDTDSSETPACRRLSDVLE CISNESGSEYTPDDRFTPTPESTPDPIPRCSTDSPIIVKTEKKSTAARVFEENLKRIASLLSCGGQIKLWQFLLELLSDE ENTDCIRWEGTTGEFRMVDPDAVARKWGQRKNKPSMNYDNMSRALRFYYDKFILNKVSGKRHTYKFNFNAIINSMQSGST QSSSSQLQSTLYGLVNTLSPNVTCGYQYPNSRPVSHNLPYPSANYTSAQYPSNRYHDNLDFPHCDTLYLQNKELFPAYED TNGFSSCQFAQINRSQNISQCQYSPSSQSYTDQRYTKSTHALKEVRTSCAYQSRTHNAMRYSPYHRSTNSPCNGLDQNPL YSALLNSY |
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