Gene
| Gene Model ID | pfu_aug2.0_361.1_04057 |
|---|---|
| Locus | scaffold361.1 : 242519 ... 245084 : - |
| To GenomeBrowser | scaffold361.1:242519..245084 |
| Genes list of scaffold | scaffold361.1 |
| Synonym | pfu_aug1.0_33531.1_12152 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 7 transmembrane receptor | GO:0005515 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_361.1_04057.t1 | 8 | 1 | Calponin | 25 | 48 | 0.0 | 186.0 | 3.8e-14 | 1.9e-10 | 39.9 |
| pfu_aug2.0_361.1_04057.t1 | 8 | 2 | Calponin | 64 | 87 | 0.0 | 186.0 | 5.8e-14 | 2.9e-10 | 39.3 |
| pfu_aug2.0_361.1_04057.t1 | 8 | 3 | Calponin | 103 | 126 | 0.0 | 186.0 | 1.4e-13 | 6.9e-10 | 38.0 |
| pfu_aug2.0_361.1_04057.t1 | 8 | 4 | Calponin | 135 | 144 | 0.0 | 186.0 | 0.035 | 180.0 | 1.6 |
| pfu_aug2.0_361.1_04057.t1 | 8 | 5 | Calponin | 142 | 165 | 0.0 | 186.0 | 1.2e-12 | 6.0e-09 | 35.0 |
| pfu_aug2.0_361.1_04057.t1 | 8 | 6 | Calponin | 174 | 183 | 0.0 | 186.0 | 0.035 | 180.0 | 1.6 |
| pfu_aug2.0_361.1_04057.t1 | 8 | 7 | Calponin | 181 | 204 | 0.0 | 186.0 | 3.9e-12 | 1.9e-08 | 33.4 |
| pfu_aug2.0_361.1_04057.t1 | 8 | 8 | Calponin | 220 | 242 | 0.0 | 186.0 | 1.5e-09 | 7.6e-06 | 25.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_361.1_04057.t1 | gi|675888810|ref|XP_009029907.1| | hypothetical protein HELRODRAFT_186180 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_361.1_04057.t1 | gi|676460276|ref|XP_009055570.1| | hypothetical protein LOTGIDRAFT_228655 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_361.1_04057.t1 | gi|675848882|ref|XP_009010001.1| | hypothetical protein HELRODRAFT_185231 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_361.1_04057.t1 | gi|675892508|ref|XP_009031756.1| | hypothetical protein HELRODRAFT_194674 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_361.1_04057.t1 | gi|684397389|ref|XP_009171834.1| | hypothetical protein T265_07910 [Opisthorchis viverrini] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_361.1_04057.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_361.1_04057.t1 atgaaaataggaggagcacgccacattgccgacatcaaagcagacgacatgaatcgtgagggccaaggtatactttctgc tcaagcaggcaccaataaatttgcttcccagaagggcatgtcgatcggatcagtcaggcatatcgctgacattagggcag acgacatgtctcaagaaggtcacggggtcattggtctacaagccggaagtaataagtttgcaagtcaatcggggatgagt tttggcgccgttcgtcacatttcggacataagagctgacgacatgtcacaagaaggtcatggggtgattggtctccaggc cggaagtaacaagggcgcaagtcaatcgggaatgagtttcggtgccgttcgtcacatttcggacattagggccgatgata tgtcacaagaaggtcaaggagttattggacttcagtctggaagtaatcaatttgccagtcaaaagggaatgtcgtttgga aacgtgcgtcatatttcagatataagagcagacgaaatgtcacaggaaggacaaggagttattggccttcaatccggaag taacaagggcgcaagtcaatctggaatgtcattcggaagcgttcgccatattgccgatatccgcgcggatgaatacgacc aaagcagcgccggaaccattggactgcagtacggcagtaacgaaggagcgagtcaatcaggcatgactggattcggaaca acgcgcggtgtggctgacatgaaaattgacgatctcgccgaagcttccagggcgatgtattga |
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Protein
| Protein ID | pfu_aug2.0_361.1_04057.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_361.1_04057.t1 MKIGGARHIADIKADDMNREGQGILSAQAGTNKFASQKGMSIGSVRHIADIRADDMSQEGHGVIGLQAGSNKFASQSGMS FGAVRHISDIRADDMSQEGHGVIGLQAGSNKGASQSGMSFGAVRHISDIRADDMSQEGQGVIGLQSGSNQFASQKGMSFG NVRHISDIRADEMSQEGQGVIGLQSGSNKGASQSGMSFGSVRHIADIRADEYDQSSAGTIGLQYGSNEGASQSGMTGFGT TRGVADMKIDDLAEASRAMY |
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