Gene
| Gene Model ID | pfu_aug2.0_3617.1_25797 |
|---|---|
| Locus | scaffold3617.1 : 1 ... 13549 : + |
| To GenomeBrowser | scaffold3617.1:1..13549 |
| Genes list of scaffold | scaffold3617.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3617.1_25797.t1 | 1 | 1 | DUF4588 | 3 | 104 | 2.3e-35 | 122.6 | 1.8e-39 | 2.6e-35 | 122.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3617.1_25797.t1 | gi|676490089|ref|XP_009065156.1| | hypothetical protein LOTGIDRAFT_108261 [Lottia gigantea] | 2.0e-34 |
| pfu_aug2.0_3617.1_25797.t1 | gi|558159031|ref|XP_006096389.1| | PREDICTED: UPF0472 protein C16orf72-like, partial [Myotis lucifugus] | 1.0e-30 |
| pfu_aug2.0_3617.1_25797.t1 | gi|584088010|ref|XP_006763665.1| | PREDICTED: UPF0472 protein C16orf72-like, partial [Myotis davidii] | 1.0e-30 |
| pfu_aug2.0_3617.1_25797.t1 | gi|641702606|ref|XP_008139984.1| | PREDICTED: UPF0472 protein C16orf72 homolog [Eptesicus fuscus] | 2.0e-30 |
| pfu_aug2.0_3617.1_25797.t1 | gi|704471968|ref|XP_010071346.1| | PREDICTED: UPF0472 protein C16orf72, partial [Pterocles gutturalis] | 2.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_3617.1_25797.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3617.1_25797.t1 atcgacaccaaggcctttctttgtgggtaccttttcaaaatgctgcttcctgtgttactagtctttataaagatagtgta gattctttaaattcttgtgtggatcttggggtgcagaaaggtcgccaacatagaaataaagacattatagcatgggtaaa aaagaagaggagacatatcagacgtgaagatttattggccttcctttgtggtaaaagtgctccggcacgtaatcgtcttt cagctccactaagacattctcagaatgctcgtctttctatggaacgtaaccattcaccaagggagttcagcgtatacagt tcaaagtgggcattatatactagatgttggaacatttag |
|
Protein
| Protein ID | pfu_aug2.0_3617.1_25797.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3617.1_25797.t1 RHQGLSLWVPFQNAASCVTSLYKDSVDSLNSCVDLGVQKGRQHRNKDIIAWVKKKRRHIRREDLLAFLCGKSAPARNRLS APLRHSQNARLSMERNHSPREFSVYSSKWALYTRCWNI |
|