Gene
| Gene Model ID | pfu_aug2.0_3625.1_19155 |
|---|---|
| Locus | scaffold3625.1 : 2576 ... 16255 : + |
| To GenomeBrowser | scaffold3625.1:2576..16255 |
| Genes list of scaffold | scaffold3625.1 |
| Synonym | pfu_aug1.0_31288.1_48021 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3625.1_19155.t1 | 10 | 1 | LRR_7 | 63 | 75 | 2.4e-06 | 26.8 | 0.22 | 550.0 | 1.6 |
| pfu_aug2.0_3625.1_19155.t1 | 9 | 1 | LRR_1 | 64 | 73 | 3.6e-11 | 41.4 | 0.7 | 1700.0 | -0.2 |
| pfu_aug2.0_3625.1_19155.t1 | 11 | 1 | LRR_6 | 70 | 84 | 3.4e-30 | 100.6 | 0.51 | 1300.0 | 0.0 |
| pfu_aug2.0_3625.1_19155.t1 | 6 | 1 | LRR_8 | 73 | 108 | 5.7e-08 | 32.3 | 0.009 | 22.0 | 4.8 |
| pfu_aug2.0_3625.1_19155.t1 | 7 | 1 | LRR_4 | 90 | 108 | 2.4e-12 | 46.1 | 0.0022 | 5.5 | 6.7 |
| pfu_aug2.0_3625.1_19155.t1 | 11 | 2 | LRR_6 | 94 | 116 | 3.4e-30 | 100.6 | 5.3e-07 | 0.0013 | 18.5 |
| pfu_aug2.0_3625.1_19155.t1 | 10 | 2 | LRR_7 | 98 | 107 | 2.4e-06 | 26.8 | 0.21 | 530.0 | 1.6 |
| pfu_aug2.0_3625.1_19155.t1 | 7 | 2 | LRR_4 | 98 | 135 | 2.4e-12 | 46.1 | 0.00022 | 0.55 | 9.9 |
| pfu_aug2.0_3625.1_19155.t1 | 9 | 2 | LRR_1 | 98 | 108 | 3.6e-11 | 41.4 | 0.0047 | 12.0 | 6.4 |
| pfu_aug2.0_3625.1_19155.t1 | 10 | 3 | LRR_7 | 124 | 134 | 2.4e-06 | 26.8 | 6.0 | 15000.0 | -3.8 |
| pfu_aug2.0_3625.1_19155.t1 | 11 | 3 | LRR_6 | 124 | 144 | 3.4e-30 | 100.6 | 0.0023 | 5.7 | 7.3 |
| pfu_aug2.0_3625.1_19155.t1 | 7 | 3 | LRR_4 | 146 | 163 | 2.4e-12 | 46.1 | 0.0024 | 5.9 | 6.6 |
| pfu_aug2.0_3625.1_19155.t1 | 11 | 4 | LRR_6 | 150 | 172 | 3.4e-30 | 100.6 | 1.0e-07 | 0.00026 | 20.7 |
| pfu_aug2.0_3625.1_19155.t1 | 6 | 2 | LRR_8 | 151 | 213 | 5.7e-08 | 32.3 | 9.6e-05 | 0.24 | 11.1 |
| pfu_aug2.0_3625.1_19155.t1 | 10 | 4 | LRR_7 | 152 | 162 | 2.4e-06 | 26.8 | 0.018 | 44.0 | 4.9 |
| pfu_aug2.0_3625.1_19155.t1 | 9 | 3 | LRR_1 | 152 | 163 | 3.6e-11 | 41.4 | 0.0086 | 21.0 | 5.6 |
| pfu_aug2.0_3625.1_19155.t1 | 11 | 5 | LRR_6 | 177 | 199 | 3.4e-30 | 100.6 | 0.00029 | 0.72 | 10.1 |
| pfu_aug2.0_3625.1_19155.t1 | 10 | 5 | LRR_7 | 179 | 191 | 2.4e-06 | 26.8 | 0.013 | 33.0 | 5.3 |
| pfu_aug2.0_3625.1_19155.t1 | 7 | 4 | LRR_4 | 179 | 214 | 2.4e-12 | 46.1 | 0.00073 | 1.8 | 8.2 |
| pfu_aug2.0_3625.1_19155.t1 | 9 | 4 | LRR_1 | 180 | 198 | 3.6e-11 | 41.4 | 0.014 | 34.0 | 5.0 |
| pfu_aug2.0_3625.1_19155.t1 | 11 | 6 | LRR_6 | 205 | 214 | 3.4e-30 | 100.6 | 0.71 | 1800.0 | -0.4 |
| pfu_aug2.0_3625.1_19155.t1 | 10 | 6 | LRR_7 | 207 | 212 | 2.4e-06 | 26.8 | 1.8 | 4500.0 | -1.2 |
| pfu_aug2.0_3625.1_19155.t1 | 11 | 7 | LRR_6 | 237 | 255 | 3.4e-30 | 100.6 | 0.2 | 510.0 | 1.3 |
| pfu_aug2.0_3625.1_19155.t1 | 7 | 5 | LRR_4 | 238 | 278 | 2.4e-12 | 46.1 | 0.033 | 81.0 | 2.9 |
| pfu_aug2.0_3625.1_19155.t1 | 9 | 5 | LRR_1 | 239 | 245 | 3.6e-11 | 41.4 | 4.6 | 11000.0 | -2.7 |
| pfu_aug2.0_3625.1_19155.t1 | 6 | 3 | LRR_8 | 239 | 305 | 5.7e-08 | 32.3 | 3.4e-05 | 0.084 | 12.6 |
| pfu_aug2.0_3625.1_19155.t1 | 11 | 8 | LRR_6 | 264 | 286 | 3.4e-30 | 100.6 | 0.00091 | 2.3 | 8.5 |
| pfu_aug2.0_3625.1_19155.t1 | 10 | 7 | LRR_7 | 267 | 278 | 2.4e-06 | 26.8 | 0.23 | 570.0 | 1.5 |
| pfu_aug2.0_3625.1_19155.t1 | 9 | 6 | LRR_1 | 267 | 278 | 3.6e-11 | 41.4 | 0.004 | 10.0 | 6.6 |
| pfu_aug2.0_3625.1_19155.t1 | 7 | 6 | LRR_4 | 269 | 307 | 2.4e-12 | 46.1 | 6.7e-08 | 0.00016 | 21.1 |
| pfu_aug2.0_3625.1_19155.t1 | 6 | 4 | LRR_8 | 288 | 307 | 5.7e-08 | 32.3 | 0.00017 | 0.42 | 10.3 |
| pfu_aug2.0_3625.1_19155.t1 | 10 | 8 | LRR_7 | 293 | 306 | 2.4e-06 | 26.8 | 0.00047 | 1.2 | 9.6 |
| pfu_aug2.0_3625.1_19155.t1 | 11 | 9 | LRR_6 | 293 | 313 | 3.4e-30 | 100.6 | 1.3e-06 | 0.0032 | 17.3 |
| pfu_aug2.0_3625.1_19155.t1 | 6 | 5 | LRR_8 | 295 | 362 | 5.7e-08 | 32.3 | 3.6e-05 | 0.088 | 12.5 |
| pfu_aug2.0_3625.1_19155.t1 | 9 | 7 | LRR_1 | 295 | 307 | 3.6e-11 | 41.4 | 0.00056 | 1.4 | 9.2 |
| pfu_aug2.0_3625.1_19155.t1 | 11 | 10 | LRR_6 | 321 | 343 | 3.4e-30 | 100.6 | 6.3e-08 | 0.00016 | 21.4 |
| pfu_aug2.0_3625.1_19155.t1 | 10 | 9 | LRR_7 | 322 | 334 | 2.4e-06 | 26.8 | 0.033 | 80.0 | 4.1 |
| pfu_aug2.0_3625.1_19155.t1 | 7 | 7 | LRR_4 | 322 | 366 | 2.4e-12 | 46.1 | 2.1e-05 | 0.051 | 13.2 |
| pfu_aug2.0_3625.1_19155.t1 | 9 | 8 | LRR_1 | 323 | 336 | 3.6e-11 | 41.4 | 0.018 | 45.0 | 4.6 |
| pfu_aug2.0_3625.1_19155.t1 | 11 | 11 | LRR_6 | 349 | 372 | 3.4e-30 | 100.6 | 0.4 | 990.0 | 0.4 |
| pfu_aug2.0_3625.1_19155.t1 | 6 | 6 | LRR_8 | 351 | 373 | 5.7e-08 | 32.3 | 0.0054 | 13.0 | 5.5 |
| pfu_aug2.0_3625.1_19155.t1 | 10 | 10 | LRR_7 | 351 | 363 | 2.4e-06 | 26.8 | 0.22 | 550.0 | 1.6 |
| pfu_aug2.0_3625.1_19155.t1 | 9 | 9 | LRR_1 | 352 | 364 | 3.6e-11 | 41.4 | 0.055 | 140.0 | 3.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3625.1_19155.t1 | gi|676473667|ref|XP_009059893.1| | hypothetical protein LOTGIDRAFT_125332 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_3625.1_19155.t1 | gi|291227715|ref|XP_002733824.1| | PREDICTED: leucine-rich repeat-containing protein 34-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_3625.1_19155.t1 | gi|524885327|ref|XP_005099272.1| | PREDICTED: leucine-rich repeat-containing protein 34-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_3625.1_19155.t1 | gi|585654593|ref|XP_006815323.1| | PREDICTED: leucine-rich repeat-containing protein 34-like isoform X2 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_3625.1_19155.t1 | gi|524885329|ref|XP_005099273.1| | PREDICTED: leucine-rich repeat-containing protein 34-like isoform X2 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3625.1_19155.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3625.1_19155.t1 atgactgacatccattccacagcgtatcgttatgaagccgtgtgcacagagctgggaatcgagcagcacccctatattgt gaaaatgtttgagaaggagaaggaagaaactattttacttaagaaaaagggagataaagtagcagatggccgtatcagtc agtttagcgagtttaaggacaacatgtttctatatttagctggtaacaacaagctcctgacagacgttaggctcggtgat aacgatgcacacgctctgtataagacgttacagaataatcagtttgtcgtcagtttggacctacgctataacaatatcac agataaaggggccgtgtatatagccaaactcatagaggaggggaatgccctgaaggacatcaatgtgatgtttaacgaca tagaagccgagggcggagaagccatagccaaagccttacagagtaatgagactttaacgtcactgagattatctggcaat aagatcggaaataagggaggcatggcctttgctcaggccctgcaggtcaattctacgctggaggcattggacctgggaga ttgtgatttgaccattgaaagtattattgcattatctaccgtccttcataacaacacgacactgaagtcactgaatgtta acagaccgattctgttcacacatcaagaagaaactaccgtccattttgccagaatgctcaaggtgagtacaacgctggaa gagttacatctacagaagtacgacatgcgagatttcggtgctaacaggctggcagaaaacctgatggacaacaatactct actataccttaacttaagctgcaatagagtaacaagagatggaatgtttgaactggcaaaggtcctaaaaaacaatacag ccctgaaggtcctggatttaagttacaacagactggaagatgatggggcctgccatgtagccgaggccctggccacatat aacacaaatctggaaacattggttgtctcctttaacaacataggaaacaaggggttatgtgcccttgccgatgccttaaa gttgaatacaacactacagaagatctatatttggggcaataaattagaggaaccagccactattgcatttgccaacctac tggagagcggaagacttgatcctaaaaacacagacgtgcagtcctacgtagtggacggtgtaacgaaactttgtgaactt aacactggaatccgtagacattattattacgctccaagttacggggatgatgttccgaaatggcaaccgcgtggaaaaaa tccacgtggatctgacatcatggccgttaaagatctgaccgtgtattaa |
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Protein
| Protein ID | pfu_aug2.0_3625.1_19155.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3625.1_19155.t1 MTDIHSTAYRYEAVCTELGIEQHPYIVKMFEKEKEETILLKKKGDKVADGRISQFSEFKDNMFLYLAGNNKLLTDVRLGD NDAHALYKTLQNNQFVVSLDLRYNNITDKGAVYIAKLIEEGNALKDINVMFNDIEAEGGEAIAKALQSNETLTSLRLSGN KIGNKGGMAFAQALQVNSTLEALDLGDCDLTIESIIALSTVLHNNTTLKSLNVNRPILFTHQEETTVHFARMLKVSTTLE ELHLQKYDMRDFGANRLAENLMDNNTLLYLNLSCNRVTRDGMFELAKVLKNNTALKVLDLSYNRLEDDGACHVAEALATY NTNLETLVVSFNNIGNKGLCALADALKLNTTLQKIYIWGNKLEEPATIAFANLLESGRLDPKNTDVQSYVVDGVTKLCEL NTGIRRHYYYAPSYGDDVPKWQPRGKNPRGSDIMAVKDLTVY |
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