Gene
| Gene Model ID | pfu_aug2.0_3625.1_19157 |
|---|---|
| Locus | scaffold3625.1 : 33766 ... 51565 : - |
| To GenomeBrowser | scaffold3625.1:33766..51565 |
| Genes list of scaffold | scaffold3625.1 |
| Synonym | pfu_aug1.0_2761.1_15934 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tuftelin-interacting protein 11 | GO:0003676 GO:0005681 GO:0006397 GO:0008380 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3625.1_19157.t1 | 2 | 1 | TIP_N | 5 | 90 | 8.7e-25 | 86.9 | 2.3e-28 | 8.7e-25 | 86.9 |
| pfu_aug2.0_3625.1_19157.t1 | 1 | 1 | G-patch | 124 | 161 | 2.3e-13 | 49.6 | 1.5e-16 | 5.7e-13 | 48.4 |
| pfu_aug2.0_3625.1_19157.t1 | 2 | 2 | TIP_N | 189 | 227 | 8.7e-25 | 86.9 | 0.53 | 2000.0 | -1.2 |
| pfu_aug2.0_3625.1_19157.t1 | 2 | 1 | GCFC | 359 | 626 | 0.0 | 299.3 | 0.0 | 0.0 | 298.2 |
| pfu_aug2.0_3625.1_19157.t1 | 2 | 2 | GCFC | 641 | 671 | 0.0 | 299.3 | 0.049 | 180.0 | 1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3625.1_19157.t1 | gi|676485190|ref|XP_009063581.1| | hypothetical protein LOTGIDRAFT_221309 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_3625.1_19157.t1 | gi|524895515|ref|XP_005104240.1| | PREDICTED: tuftelin-interacting protein 11-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_3625.1_19157.t1 | gi|530617632|ref|XP_005298544.1| | PREDICTED: tuftelin-interacting protein 11 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_3625.1_19157.t1 | gi|632983595|ref|XP_007908724.1| | PREDICTED: tuftelin-interacting protein 11 isoform X2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_3625.1_19157.t1 | gi|564245401|ref|XP_006261823.1| | PREDICTED: tuftelin-interacting protein 11 [Alligator mississippiensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3625.1_19157.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3625.1_19157.t1 atgtcgtcacctgaggtagagaagtttgaaatcacagacgatgatctcatgcgggagttcaatcccagaagtggatttcg acagacaaaaaatcaggccatatatggtatgtgggccgacagcgatgatgaggatcagcgtagcggtttcgggggcggat ccaggcggaagaagaagagtgacctatccatgcccgtaaactttgtcagcggaggaatcaaacaaggcgataaaatcaaa aaagaagaaaatgaagattctgattctgatgaggagccgatgatagtccagcctccaaggtcattccgacaggataaatc tgccagcaggaggggcgggaaacagtttgctgggtttggtagaaaggacgtcttagaatcaatgggttacaaaccaggag aaggtctcggtaagaagggacaaggtatcacaacaccagtagaggcagtgaaacggaaaaacacaagagccgccatcggt gcgttcggtacagagaggtcagaacgatcgttacaggatttccctgtgtatgattcggaggaagaagaagacaagaaatt caaagaggagctgtctcagtggaagagaaaatcagagcagggaaacaagaagaaaccaaaatatgtctacaaaacggcac aggaactgatagagtctggtactggcaagaagaaacatgttccgaataaatcctccaaggtcaaggtcattgatatgacc ggcaaagagcagagagtgctgtcaggttaccatgccatagcaacacgacatgaccgaccagacgaggatgaagatatcat agaggaagacacgacacaaaggaaagtgttccaaatgccggaactaatgcacaacctcaacatcttagtagatatggcag aggaagaaattatacagaatgatagaaaactgcggtatgagaaagatcacattatcaacatgaatcatgagaaattacga ctcgatgaaatctgtgaccaagaggagaaacagctagataaactacgcaatgttctggaaattgtcgacagttgtgaaga gcgcatgaagccaggtaacgacaatcccctcacactggatgaatgtgctggcattttcaaatctctacaggacgattatt acgaggaatataagatgtacgacttgtcctctttggccgttgccatggtgtttccaatgatgcgtcagtatttgagtcaa tgggaccctctcagcgatccgcgctacggtatagacacaattaaacagtggagattcctattagaggattataacagccg ttatgtacccgaccctaaaaatatggacgtgtatcagagattactgtgggacgtatggctgccgtttgtgaggaccacag tgttgaagtggaatgtaagagcctgtgatcccctgatagaattaatagaagcttggaaacccgtcattccgtcatacatc accgaaaacatcctcgaccagctcgtgttgccacggttactacaggaagtcgagaactggaatccgcttaccgacaccat gcccattcatgcatggctgcatccatggttaccactaatggcagaaaaacttgaaccactttacgcaccaatcagacaca agctttcaagtgcactgacgaactggcacccatccgatgcctcggcaaaggtcattctacaaccctgggtcaaggtcttt aaacaaggtcatatggaagccttcttggtaaagaatatactaccaaagctagccatgtgtatgggggaatttgtcatcaa tcctgttcatcaagtattagaaccatggcattgggtaatgtcgtggagtgacatcataccaaccaagcacctggtggaaa tgttagataaaacgttctttccaaaatggcgtacgatcctgacgacatggcttggcaacatgccaaattatgacgagatc acaaagtggtacttaggatggaagtccctcttctcagaggagtacctatcacaccctgtcatcaaagagaattttgccaa agccctggatgtgatgaatcggtcagtctctggccacatgcaacctggactaaaggagaatgtagcatatttctctcata tggaaaaacggcagatggctgattcaagttcctcgtcccgctctccaccgcgtctccataaggaatcaaatgaacagtat gcaaggagtgcttctagtacaacatcctacacaagtagctttaaggacttgatcgagaaaaaggctgcagagttgaacat gttgtttatgccggtcataggaaaatcacaggaaggaaaacaagtgtacagattcggacaattactgatgtattttgaca ggaatgtggtttttatgcaacaatcagactcattatgggttcctgtgtccatacagacgttagtggataaagcttctgca agtcagggttatcccccttga |
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Protein
| Protein ID | pfu_aug2.0_3625.1_19157.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3625.1_19157.t1 MSSPEVEKFEITDDDLMREFNPRSGFRQTKNQAIYGMWADSDDEDQRSGFGGGSRRKKKSDLSMPVNFVSGGIKQGDKIK KEENEDSDSDEEPMIVQPPRSFRQDKSASRRGGKQFAGFGRKDVLESMGYKPGEGLGKKGQGITTPVEAVKRKNTRAAIG AFGTERSERSLQDFPVYDSEEEEDKKFKEELSQWKRKSEQGNKKKPKYVYKTAQELIESGTGKKKHVPNKSSKVKVIDMT GKEQRVLSGYHAIATRHDRPDEDEDIIEEDTTQRKVFQMPELMHNLNILVDMAEEEIIQNDRKLRYEKDHIINMNHEKLR LDEICDQEEKQLDKLRNVLEIVDSCEERMKPGNDNPLTLDECAGIFKSLQDDYYEEYKMYDLSSLAVAMVFPMMRQYLSQ WDPLSDPRYGIDTIKQWRFLLEDYNSRYVPDPKNMDVYQRLLWDVWLPFVRTTVLKWNVRACDPLIELIEAWKPVIPSYI TENILDQLVLPRLLQEVENWNPLTDTMPIHAWLHPWLPLMAEKLEPLYAPIRHKLSSALTNWHPSDASAKVILQPWVKVF KQGHMEAFLVKNILPKLAMCMGEFVINPVHQVLEPWHWVMSWSDIIPTKHLVEMLDKTFFPKWRTILTTWLGNMPNYDEI TKWYLGWKSLFSEEYLSHPVIKENFAKALDVMNRSVSGHMQPGLKENVAYFSHMEKRQMADSSSSSRSPPRLHKESNEQY ARSASSTTSYTSSFKDLIEKKAAELNMLFMPVIGKSQEGKQVYRFGQLLMYFDRNVVFMQQSDSLWVPVSIQTLVDKASA SQGYPP |
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