Gene
| Gene Model ID | pfu_aug2.0_363.1_10667 |
|---|---|
| Locus | scaffold363.1 : 45406 ... 69975 : + |
| To GenomeBrowser | scaffold363.1:45406..69975 |
| Genes list of scaffold | scaffold363.1 |
| Synonym | pfu_aug1.0_14960.1_18181 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_363.1_10667.t1 | 1 | 1 | Tetraspannin | 9 | 252 | 0.0 | 169.6 | 0.0 | 0.0 | 169.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_363.1_10667.t1 | gi|676433047|ref|XP_009046772.1| | hypothetical protein LOTGIDRAFT_171957 [Lottia gigantea] | 4.0e-37 |
| pfu_aug2.0_363.1_10667.t1 | gi|548481848|ref|XP_005748985.1| | PREDICTED: tetraspanin-1-like [Pundamilia nyererei] | 1.0e-34 |
Transcript
| Transcript ID | pfu_aug2.0_363.1_10667.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_363.1_10667.t1 atgactggctgctgcggtacaatggccaagtgcctgcttattctcttcaacttgatcttttggctgtctggtgcggccat catgggagttggtgtgtggttcctggtcgacaagaacatcaagtcgtactttgacgttatcgacatagacacgcaggatg agtactttaagtacactgcatatttactgatagcttttggggcatttgtcttctttgtcggcttttgcggatgttgcgga gcaataagggacagtaaatgtctgctgggattctatgtgttcttcctcgttcttatcattggtggtgaaattgccggagg tgttcttatgattctgtacaagaacaggattgagggagatctcaccaaaattcttcaggacacaataaaacagaagtatg ccactaatacaaatgtacaaaatgcctggaattttgtacaagtagagcttagctgctgcggggctactggagcatcagat tatgccaatgtctcctctacatcgacccttggatttccccttacttgctgcgaactgacagacaaagacgctgctctgaa tgatccattggcggctacgccacgtaaccgtacagaatgtggcaatcagaaatcacccttctaccataacaagggatgta aagatcagctactggacctggcttcacgttacagtataatcctcattgttatagccatggtaattggaggactggagata tttggtattattgcagccatttgtgtctgcaggaatgctgggaaggacgattga |
|
Protein
| Protein ID | pfu_aug2.0_363.1_10667.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_363.1_10667.t1 MTGCCGTMAKCLLILFNLIFWLSGAAIMGVGVWFLVDKNIKSYFDVIDIDTQDEYFKYTAYLLIAFGAFVFFVGFCGCCG AIRDSKCLLGFYVFFLVLIIGGEIAGGVLMILYKNRIEGDLTKILQDTIKQKYATNTNVQNAWNFVQVELSCCGATGASD YANVSSTSTLGFPLTCCELTDKDAALNDPLAATPRNRTECGNQKSPFYHNKGCKDQLLDLASRYSIILIVIAMVIGGLEI FGIIAAICVCRNAGKDD |
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