Gene
| Gene Model ID | pfu_aug2.0_3637.1_25804 |
|---|---|
| Locus | scaffold3637.1 : 9755 ... 18465 : - |
| To GenomeBrowser | scaffold3637.1:9755..18465 |
| Genes list of scaffold | scaffold3637.1 |
| Synonym | pfu_aug1.0_11374.1_03065 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tripartite motif-containing protein 2-like | GO:0005515 GO:0006259 GO:0006355 GO:0006464 GO:0007275 GO:0016881 GO:0031981 GO:0032991 GO:0043232 GO:0044763 GO:0048523 GO:0048856 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3637.1_25804.t1 | 2 | 1 | zf-B_box | 16 | 57 | 6.0e-14 | 51.6 | 2.2e-08 | 6.6e-05 | 22.7 |
| pfu_aug2.0_3637.1_25804.t1 | 2 | 2 | zf-B_box | 75 | 112 | 6.0e-14 | 51.6 | 5.1e-12 | 1.5e-08 | 34.3 |
Transcript
| Transcript ID | pfu_aug2.0_3637.1_25804.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3637.1_25804.t1 atgagtgacaacggagcctcagcgattccatcccagacatttgtggagtgtggccaatgtaaagggaacgtcaacatatc atggttttgtaaaaactgtccttgctcactttgtgacacatgcgctaccgcccacaagacatctcatcaatacaaatccc atacagtcataccacggacatacaccgtcctccgattgtatggtccggcaaaattagcagaacaatgtcacattcatcca gaaaaagaaatatcatcatactgcaatggttgcggcattccatgctgtgtcacgtgtatggtgaacgatcataaacgtca tgacttttccaccatagaagacaagtacctggatgctgagaaaggtctgaataagtactacagacagctcgacaccgaca tcagaccaacgcttgaaaagatgaaggaacaagcaagagccgatgccaaggaagatgacagccatgttgagaaagtcata aatgacattaacgatttccgaaaagatgtcgttccgaattttaatagagcatgtgatgatctcattgttcaggttcaatc gttttcaagtaaaacaaatgaagggttgaaagaaattgaaatctcactgaaaaatcttgaacacataaagaaagaaattg aagtaaaaatagcaaggggaaatttagacctaattaaatatacgcctcccaaaattgatacacttgttcccaaattaaaa ggtccgtcaaatgttgtcccaatttttgtaccttctaaaaatctgcttgatttgatgaagaaaccagttggaattattca gtcaaaagagatcaagaaagatgaaattaagagcagaaacataacaaatatcagatctgtacatttacaaaaaaaggctt catttaagagtaagatagacgtcacatccttgaccacagcaggtaataacatggcctgggttatgtgttataggagtcct accatgtatctgtataacgatgagggtaaggtagtcaggtctgtgacagtgggaggtagtgaggggatcaatgacatggc aatcacacagtcaggggagatgattgttacatgtggagacaggaaagtggggcgtgtatcaaacggtcaggatttgtgtg taattaatagcgctatgaatgttgtatgtgtggatgagagagataatgtgagatggctatatgacggtaaggaagctaaa caaggggagtccatatttaatccacgttgtctatgtgttgatcagtacaaaaacttgctggtcactgatggaaataacta ctgtgtacattatatagatagggagggaggactgatacaggtgataatgacagtagaacaagtaggattacggcgtcact ggggaatctgtgtagatgaagtaacaggacatgtctgggttggaaatagttctgggaatgttgccattgctaaacactta gaataa |
|
Protein
| Protein ID | pfu_aug2.0_3637.1_25804.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3637.1_25804.t1 MSDNGASAIPSQTFVECGQCKGNVNISWFCKNCPCSLCDTCATAHKTSHQYKSHTVIPRTYTVLRLYGPAKLAEQCHIHP EKEISSYCNGCGIPCCVTCMVNDHKRHDFSTIEDKYLDAEKGLNKYYRQLDTDIRPTLEKMKEQARADAKEDDSHVEKVI NDINDFRKDVVPNFNRACDDLIVQVQSFSSKTNEGLKEIEISLKNLEHIKKEIEVKIARGNLDLIKYTPPKIDTLVPKLK GPSNVVPIFVPSKNLLDLMKKPVGIIQSKEIKKDEIKSRNITNIRSVHLQKKASFKSKIDVTSLTTAGNNMAWVMCYRSP TMYLYNDEGKVVRSVTVGGSEGINDMAITQSGEMIVTCGDRKVGRVSNGQDLCVINSAMNVVCVDERDNVRWLYDGKEAK QGESIFNPRCLCVDQYKNLLVTDGNNYCVHYIDREGGLIQVIMTVEQVGLRRHWGICVDEVTGHVWVGNSSGNVAIAKHL E |
|