Gene
| Gene Model ID | pfu_aug2.0_3637.1_25805 |
|---|---|
| Locus | scaffold3637.1 : 29126 ... 32120 : + |
| To GenomeBrowser | scaffold3637.1:29126..32120 |
| Genes list of scaffold | scaffold3637.1 |
| Synonym | pfu_aug1.0_16911.1_47032 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3637.1_25805.t1 | 4 | 1 | Ank_2 | 2 | 52 | 6.4e-34 | 116.1 | 6.3e-10 | 1.2e-06 | 28.7 |
| pfu_aug2.0_3637.1_25805.t1 | 8 | 1 | Ank_4 | 3 | 44 | 7.7e-28 | 96.3 | 1.8e-09 | 3.3e-06 | 27.4 |
| pfu_aug2.0_3637.1_25805.t1 | 10 | 1 | Ank_3 | 3 | 17 | 1.0e-21 | 74.8 | 3.8 | 7000.0 | -2.1 |
| pfu_aug2.0_3637.1_25805.t1 | 5 | 1 | Ank_5 | 14 | 55 | 1.5e-20 | 72.6 | 8.4e-09 | 1.6e-05 | 25.0 |
| pfu_aug2.0_3637.1_25805.t1 | 6 | 1 | Ank | 23 | 52 | 5.8e-33 | 111.0 | 3.0e-08 | 5.6e-05 | 22.7 |
| pfu_aug2.0_3637.1_25805.t1 | 10 | 2 | Ank_3 | 23 | 51 | 1.0e-21 | 74.8 | 1.2e-05 | 0.022 | 14.9 |
| pfu_aug2.0_3637.1_25805.t1 | 8 | 2 | Ank_4 | 33 | 81 | 7.7e-28 | 96.3 | 1.5e-07 | 0.00027 | 21.3 |
| pfu_aug2.0_3637.1_25805.t1 | 4 | 2 | Ank_2 | 61 | 121 | 6.4e-34 | 116.1 | 8.7e-18 | 1.6e-14 | 53.9 |
| pfu_aug2.0_3637.1_25805.t1 | 5 | 2 | Ank_5 | 63 | 101 | 1.5e-20 | 72.6 | 1.7e-08 | 3.2e-05 | 24.0 |
| pfu_aug2.0_3637.1_25805.t1 | 6 | 2 | Ank | 64 | 92 | 5.8e-33 | 111.0 | 2.6e-10 | 4.9e-07 | 29.2 |
| pfu_aug2.0_3637.1_25805.t1 | 10 | 3 | Ank_3 | 64 | 88 | 1.0e-21 | 74.8 | 1.3e-06 | 0.0024 | 17.9 |
| pfu_aug2.0_3637.1_25805.t1 | 8 | 3 | Ank_4 | 77 | 114 | 7.7e-28 | 96.3 | 5.6e-07 | 0.001 | 19.4 |
| pfu_aug2.0_3637.1_25805.t1 | 5 | 3 | Ank_5 | 80 | 131 | 1.5e-20 | 72.6 | 5.2e-10 | 9.7e-07 | 28.8 |
| pfu_aug2.0_3637.1_25805.t1 | 6 | 3 | Ank | 94 | 122 | 5.8e-33 | 111.0 | 6.4e-08 | 0.00012 | 21.7 |
| pfu_aug2.0_3637.1_25805.t1 | 10 | 4 | Ank_3 | 94 | 121 | 1.0e-21 | 74.8 | 1.9e-09 | 3.6e-06 | 26.6 |
| pfu_aug2.0_3637.1_25805.t1 | 8 | 4 | Ank_4 | 96 | 147 | 7.7e-28 | 96.3 | 1.1e-11 | 2.0e-08 | 34.5 |
| pfu_aug2.0_3637.1_25805.t1 | 4 | 3 | Ank_2 | 127 | 157 | 6.4e-34 | 116.1 | 3.7e-08 | 6.8e-05 | 23.1 |
| pfu_aug2.0_3637.1_25805.t1 | 6 | 4 | Ank | 128 | 157 | 5.8e-33 | 111.0 | 1.6e-08 | 3.0e-05 | 23.5 |
| pfu_aug2.0_3637.1_25805.t1 | 8 | 5 | Ank_4 | 128 | 161 | 7.7e-28 | 96.3 | 4.3e-07 | 0.0008 | 19.8 |
| pfu_aug2.0_3637.1_25805.t1 | 10 | 5 | Ank_3 | 128 | 154 | 1.0e-21 | 74.8 | 0.00013 | 0.25 | 11.7 |
| pfu_aug2.0_3637.1_25805.t1 | 5 | 4 | Ank_5 | 128 | 157 | 1.5e-20 | 72.6 | 0.00038 | 0.7 | 10.2 |
| pfu_aug2.0_3637.1_25805.t1 | 10 | 6 | Ank_3 | 166 | 174 | 1.0e-21 | 74.8 | 2.9 | 5300.0 | -1.8 |
| pfu_aug2.0_3637.1_25805.t1 | 8 | 6 | Ank_4 | 201 | 224 | 7.7e-28 | 96.3 | 0.018 | 33.0 | 5.1 |
| pfu_aug2.0_3637.1_25805.t1 | 6 | 5 | Ank | 208 | 223 | 5.8e-33 | 111.0 | 0.0081 | 15.0 | 5.6 |
| pfu_aug2.0_3637.1_25805.t1 | 10 | 7 | Ank_3 | 208 | 222 | 1.0e-21 | 74.8 | 0.13 | 250.0 | 2.4 |
| pfu_aug2.0_3637.1_25805.t1 | 5 | 5 | Ank_5 | 208 | 222 | 1.5e-20 | 72.6 | 1.3 | 2300.0 | -1.0 |
| pfu_aug2.0_3637.1_25805.t1 | 4 | 4 | Ank_2 | 210 | 260 | 6.4e-34 | 116.1 | 0.005 | 9.2 | 6.6 |
| pfu_aug2.0_3637.1_25805.t1 | 8 | 7 | Ank_4 | 227 | 242 | 7.7e-28 | 96.3 | 0.38 | 700.0 | 0.9 |
| pfu_aug2.0_3637.1_25805.t1 | 10 | 8 | Ank_3 | 228 | 239 | 1.0e-21 | 74.8 | 3.9 | 7200.0 | -2.2 |
| pfu_aug2.0_3637.1_25805.t1 | 6 | 6 | Ank | 246 | 258 | 5.8e-33 | 111.0 | 0.028 | 51.0 | 3.9 |
| pfu_aug2.0_3637.1_25805.t1 | 8 | 8 | Ank_4 | 246 | 262 | 7.7e-28 | 96.3 | 0.047 | 87.0 | 3.8 |
| pfu_aug2.0_3637.1_25805.t1 | 10 | 9 | Ank_3 | 247 | 258 | 1.0e-21 | 74.8 | 1.2 | 2200.0 | -0.6 |
| pfu_aug2.0_3637.1_25805.t1 | 10 | 10 | Ank_3 | 281 | 288 | 1.0e-21 | 74.8 | 4.4 | 8100.0 | -2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3637.1_25805.t1 | gi|470460577|ref|XP_004341477.1| | ankyrin, putative [Acanthamoeba castellanii str. Neff] | 9.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_3637.1_25805.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3637.1_25805.t1 atgttcgaaattgttgagtttattctgcgatcttcggacgatgttgatataaattacactaattctaatggaagaaacgc tctatgcatgtcaattaaggcaggagatttgaatgttgtaaaacttctggtcgaaaagggggcttctgtaaacgtaaatg aagcaaatatgattttttttgacacaatccctcttcatttggcgacggaatgtgatgacgtaaatattttggagttttta cttagaaatggcgcgaatgtgaattcaacggacaaattaggatgttctgctcttcatcgtgcaattaaaagtaaaaacgt agacaaagttaaaattcttttggagaatggagctgatttgaaagcaatggaatattttgaaatgaccccattatgctctg ctgtcatgatggagtcaccagaaattgtgcagctgctgctaaatgccggatctgatccaaacgatacagatttatccgga atggaaatgggaagttacagatgcagtctgttacatacagcacaaatgctgaaagcaggagcgaaactggagtctgtgga gcgtgtgagttattacaaaagtctcctagtagacgccggatggtatctacaccgggagccctgtatggacgttatcagac tcctagtagacgccggattggacttacaccgggagccctgtatgcacgttatcagactcctagtggacgccggatgggaa ctacactgggagccctgtatggacgttatcagactcctagtggacgccggatgggagctacaccgggagcccgctatgga gattgttctagagaacgctcaggaacgcaacacagaaatatatgacgtcatcaaggcgcttcatttaaacccttatcctc ttgtgaacttatgccgcattgcaattaaacgacatttgctgacatgtactcatgatagatctatttatacgagagtctta gagcttcctttacctaaaaaaactgagagatttgttatgggtgttacataa |
|
Protein
| Protein ID | pfu_aug2.0_3637.1_25805.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3637.1_25805.t1 MFEIVEFILRSSDDVDINYTNSNGRNALCMSIKAGDLNVVKLLVEKGASVNVNEANMIFFDTIPLHLATECDDVNILEFL LRNGANVNSTDKLGCSALHRAIKSKNVDKVKILLENGADLKAMEYFEMTPLCSAVMMESPEIVQLLLNAGSDPNDTDLSG MEMGSYRCSLLHTAQMLKAGAKLESVERVSYYKSLLVDAGWYLHREPCMDVIRLLVDAGLDLHREPCMHVIRLLVDAGWE LHWEPCMDVIRLLVDAGWELHREPAMEIVLENAQERNTEIYDVIKALHLNPYPLVNLCRIAIKRHLLTCTHDRSIYTRVL ELPLPKKTERFVMGVT |
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