Gene
| Gene Model ID | pfu_aug2.0_3637.1_25807 |
|---|---|
| Locus | scaffold3637.1 : 42667 ... 44315 : - |
| To GenomeBrowser | scaffold3637.1:42667..44315 |
| Genes list of scaffold | scaffold3637.1 |
| Synonym | pfu_aug1.0_5630.1_09176 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3637.1_25807.t1 | 1 | 1 | TatD_DNase | 260 | 463 | 9.0e-33 | 113.5 | 2.5e-36 | 1.2e-32 | 113.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3637.1_25807.t1 | gi|260799979|ref|XP_002594914.1| | hypothetical protein BRAFLDRAFT_208748 [Branchiostoma floridae] | 3.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_3637.1_25807.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3637.1_25807.t1 atgtctgcagttacagtcacgttgagaggacagccaccttctcgtggtgcatggagggaaagccactacagccacttcag tcgacatgacgagagctgccctatcccttcttgtaattcacatgacaggcgacttaggagacatgtgattgatagacatt taccagaagctttccggtatgccgtggcaaccagggagaatatcgccatccaagtggacgccctacggtggttgattagg acagtcttaggacctagagcgactctcacggatgctgtcgtctggatgaacaggccaggcagaattccctacggaacctg gattggggatgaacaccaggacgtttatgaccaagcctgccatttcctgggtgagtcatccagatgtatgttcaccgcgc atcctatcaattcgcccgctgtcctgatccattggaggtgtatcctggccctgttgtcaaggtgttcccaggagcaggtg cgtgagttcaggaggttcccgaacgtgagcgatccggttgtattagtggaacctgaggaggagcatagccctaatgtggc tatggttgtggacaatgaagagagtgaagaggaccctggagatatgattcttttagaccaggcagttggctctgatgatg aggaacccgagcagagacaggagcagagagccgtgaatcataagcctttcgccagagttgaggtagccggaggggtcgta gtgtttagtgagccaaaaaattaccctccagtggatttctccatgaatggaccttggatggttgccgtcggagtccaccc taagcactacgacaccctgacagtagagcgttccattgtgttgaaccagttgttgtcccacccgaaggtagtggcccttg gagaatgtggattggacagaacaattcctccatctaaatggttacggcaggatgaggtgttcaagcggatgctgaattta gcccggccaaatcagcccctcattctgcatctccgtggtccaaaaggtgacatctacggactagacgttaacgcacgctg taaagaccttatggagaccaggtgtgacaggaaccagaaaatccatgttcattgttttaagggcaccgaggagatggttg agtcatggcttaggaagttcccaaatacttattttggtatcacagcagctgtccagtcatttgatgatcttcagatcgct ggtcttcgggccattccaagagacaagttgctgttggagacagattcgccttatttccctctaggaggagcagaaatcaa cactcctgcctacattggagatgtcggacactatgtcatgactcatctggatcttcgtccatctgaagtgttccagagga ccctggacaacgcattagcactgtatggtgctaaccagtag |
|
Protein
| Protein ID | pfu_aug2.0_3637.1_25807.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3637.1_25807.t1 MSAVTVTLRGQPPSRGAWRESHYSHFSRHDESCPIPSCNSHDRRLRRHVIDRHLPEAFRYAVATRENIAIQVDALRWLIR TVLGPRATLTDAVVWMNRPGRIPYGTWIGDEHQDVYDQACHFLGESSRCMFTAHPINSPAVLIHWRCILALLSRCSQEQV REFRRFPNVSDPVVLVEPEEEHSPNVAMVVDNEESEEDPGDMILLDQAVGSDDEEPEQRQEQRAVNHKPFARVEVAGGVV VFSEPKNYPPVDFSMNGPWMVAVGVHPKHYDTLTVERSIVLNQLLSHPKVVALGECGLDRTIPPSKWLRQDEVFKRMLNL ARPNQPLILHLRGPKGDIYGLDVNARCKDLMETRCDRNQKIHVHCFKGTEEMVESWLRKFPNTYFGITAAVQSFDDLQIA GLRAIPRDKLLLETDSPYFPLGGAEINTPAYIGDVGHYVMTHLDLRPSEVFQRTLDNALALYGANQ |
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